KEGG   Papio anubis (olive baboon): 101023432
Entry
101023432         CDS       T07474                                 
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein isoform X1
  KO
K12857  Prp8 binding protein
Organism
panu  Papio anubis (olive baboon)
Pathway
panu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:panu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101023432 (SNRNP40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:panu03041]
    101023432 (SNRNP40)
Spliceosome [BR:panu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101023432 (SNRNP40)
 Complex C
   U5 SnRNP specific factors
    101023432 (SNRNP40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_RIG_1st Cytochrom_D1 WD40_like WDR54 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 101023432
NCBI-ProteinID: XP_003891522
Ensembl: ENSPANG00000017889
LinkDB
Position
1:complement(29603728..29641580)
AA seq 357 aa
MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM
LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD
GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG
LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI
AAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgatagaacaacagaagcgtaagggcccagagttgccgctggttccagtcaagcggcag
cggcatgagttgctgctgggagcggggtcgggcccgggagccgggcagcagcaggcgacg
ccgggagctttgctgcaagcgggacctccaaggtgttcctcccttcaagccccaatcatg
ctgctctctggacatgaaggggaagtatactgctgcaagttccaccccaacggatccacc
ttagcatctgcaggatttgaccgactgatattgttgtggaatgtctatggtgactgtgat
aactatgccacactgaaaggacacagtggagcagtgatggaattgcattacaacacagat
ggcagtatgctcttctcagcatccacagataaaactgtggctgtgtgggatagtgaaaca
ggcgagagggttaaaaggctaaagggacatacctcctttgtgaattcctgttatccagcc
aggagaggccctcagcttgtctgcactggcagtgacgatggcacagttaagctttgggac
atccggaagaaagcagccatccagacatttcagaacacgtaccaggtgttagctgtgacc
ttcaatgacacaagtgatcagattatttctggtggaatagacaatgatatcaaggtctgg
gacctgcgccagaacaagctaacctacaccatgagaggccatgcagattcagtgactggc
ctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggacaatacagttcgt
gtctgggatgtccggccatttgcccccaaagagaggtgtgtaaagatatttcaaggaaat
gtgcacaactttgaaaagaaccttctgagatgttcttggtcacctgatggaagcaaaata
gcagctggctcagctgacaggtttgtgtatgtgtgggataccacaagcaggagaatatta
tataagctgcccggccatgctggctccatcaatgaagttgctttccaccctgacgagccc
atcattatctcagcatcgagtgacaagagactgtatatgggagagattcagtga

DBGET integrated database retrieval system