KEGG   Pandoraea sp. XJJ-1: OYT13_02200
Entry
OYT13_02200       CDS       T10414                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
panx  Pandoraea sp. XJJ-1
Pathway
panx02020  Two-component system
Brite
KEGG Orthology (KO) [BR:panx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    OYT13_02200
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:panx02022]
    OYT13_02200
Two-component system [BR:panx02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   OYT13_02200
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 AAA_16 AAA_2 HTH_50 AAA HTH_30 HTH_Tnp_ISL3 TIP49 AAA_7
Other DBs
NCBI-ProteinID: WAL85123
LinkDB
Position
494565..495917
AA seq 450 aa
MYKNLQILFVEDDELVRRATLQSLQLAGLDAFGLASAEAARERITPDFAGIVVSDIRLIG
MSGLELLSHLRQHAPEVPVILVTGHGDISMAVQAIRDGAYDFIEKPFAPDRLIESAKRAL
ETRKLMLENQALRRELAEQGGRASRIIGRSPAMETLRTLIANVAMTDAPVLINGDTGTGK
ELVARSLHELSRRRDAPFVALNCGALPEAIFESEMFGHEVGAFTGAAKRRIGKLEHASGG
TLFLDEIESMPLALQVKLLRVLQEGVLERLGSNQSVRVDCRVVAAAKGDMEALVREGTFR
RDLYYRLNVVTLALPPLRERREDILPLFEHFMLDAAVRYGRPAPVVSDRMRQELMQADWP
GNVRELRNAADRLVLGVASAPEGDSLAPLPLKEQVDRFERAVLQEALEHSKGNVAATAEA
LHVPKATLYEKLKRYGLHTRSQGEGGDSGR
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgtacaagaaccttcagatcttatttgtcgaagacgacgaactcgtgcggcgtgccacg
ctgcagagcctgcaactcgccggactcgacgccttcgggcttgcctcggccgaagccgcg
cgcgaacgcatcacgccggatttcgccggcatcgtcgtgtcggacattcgcctgatcggc
atgagcggacttgagctgctctcgcatctgcgtcagcacgcgcccgaggtgcccgtgatc
ctcgtgaccggtcacggcgatatttcgatggccgttcaggcgattcgcgacggtgcctac
gacttcatcgagaagccgtttgcgccggaccgtctgatcgaatcggccaagcgtgcgttg
gaaacgcgcaagctcatgctggagaaccaggcgttgcggcgcgaactggcggaacagggc
ggccgcgcctcgcgcatcatcgggcgcagtccggcaatggagacgctgcgcacgctcatc
gccaacgtggcgatgaccgatgcgccggtgctcatcaacggcgacacggggacgggcaag
gagctggtggcgcgcagtctgcatgaactgtcgcgccgccgcgatgcgccgttcgtcgcg
ctgaactgcggcgcgttgcccgaggcgattttcgagagcgagatgttcggtcacgaggtg
ggcgcgtttaccggcgcggccaaacgtcgcatcggaaagcttgaacatgcgtcgggcggc
acgttgtttctcgacgagatcgagagcatgccgcttgcgttgcaggtcaagctgctgcgc
gttttgcaggaaggtgtgctggaacggttgggctcgaatcagtcggtgcgtgtcgactgc
cgcgtggtcgctgctgcgaagggcgatatggaagcgctggtgcgcgagggcacattccgt
cgcgatctgtattaccggctgaatgtggtgacgctggcgttgccgccgctgcgcgagcgt
cgcgaggatatcctgccgctgttcgagcacttcatgctggacgccgccgtgcgctatgga
cgtccggcgcccgtggtctcggatcggatgcgtcaggagctgatgcaggcagactggccg
ggcaacgtgcgcgagcttcgcaatgcggcggatcgtctggtgctcggtgtggcgagtgcg
cccgagggcgactcgctcgcgccgctgccgctcaaggagcaggtggaccgcttcgagcgc
gccgtgctgcaagaggcgctggagcacagcaagggcaacgtggcggcgacggccgaggcg
ctgcacgtgcccaaggcgacgctgtatgaaaagctcaagcgttacggacttcacacgcgc
agtcagggcgagggcggcgacagcgggcgttga

DBGET integrated database retrieval system