KEGG   Pandoraea sp. XJJ-1: OYT13_04055
Entry
OYT13_04055       CDS       T10414                                 
Symbol
sctD
Name
(GenBank) type III secretion system inner membrane ring subunit SctD
  KO
K03220  type III secretion protein D
Organism
panx  Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:panx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panx02044]
    OYT13_04055 (sctD)
Secretion system [BR:panx02044]
 Type III secretion system
  Type III secretion core apparatus
   OYT13_04055 (sctD)
SSDB
Motif
Pfam: Y4YQ_C CHAD
Other DBs
NCBI-ProteinID: WAL83649
LinkDB
Position
complement(893096..894427)
AA seq 443 aa
MSMLTLTLLDGPLAGRPMPLPPGTLTIGDSDSDIAMTLDHGAQIALGVDDDGVRLLTPAP
VWVDGVPVAASDDRAADTLRLPLHTAIDLAGLGIWLGDGSESAPAPMPKRPERRPEHTAS
PRMTLAPESPQAAEAPARRARAQTAWIAVTGLSLLIAAAGVAIWRTGTANVIAAPPPPDA
LKALAARVAPRVVLDHSGNAVRLSGGCIDDDALARLRAEARWLGKALSDETWCPANSIQT
VRTLLRLHGFGTAQVSVTPDGEVLIGAPTVADARWRSAANALDALALPHGWRVAEGTANS
FERLLKTLRDAGQLRGIDIARDRNGWRLTGALTVGRQASLKGIVDTWNTGDNAMPVRIEP
LPPQIPTLVETGFSAPLVSIGGSPNAPQITLADGTRLAQGARLPGGTRVIAIHTGGVSIG
SHDRLFYLPLSPETLYDDSPDPA
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgagcatgctcacgctcacgctgctcgacggccccctcgccggacgacccatgccgcta
ccaccgggcacactcacgatcggcgacagtgattccgatatcgcgatgacgctcgatcat
ggcgcccagatcgcgctgggcgtcgacgacgatggcgttcgcctgctcacgccggcgcca
gtctgggtcgacggcgtgcccgtcgccgcatcggatgatcgcgcggccgacacgctcagg
ctcccgctgcatacggcgatcgatcttgccggcctcggcatctggctcggcgacggcagc
gaaagcgctcccgcgcccatgccaaaacgtccagagcggcgtcccgagcacacggcatcg
cctcgcatgaccctcgcgcccgaatccccccaagcggccgaagcccctgcgcggcgcgct
cgcgcccagaccgcctggatcgcagtcacgggactatcgctactgatcgcggcggcgggc
gtcgcgatctggcgcacgggaaccgccaacgtcatcgccgcgccgccaccgcccgatgcg
ctcaaagcgctcgcggcacgcgtcgcgccccgcgtcgtgctggatcacagcggcaatgcg
gtacgcctgtccggtggctgcatcgacgacgacgcgcttgcacgactgcgcgccgaggcg
cgttggctgggcaaagcgttgagcgacgagacctggtgccccgcgaattccatacagaca
gtgcgcacgttgctacgcttgcacggcttcggtaccgcacaggtgagcgtcacgccggac
ggcgaagtgctcatcggtgcgccgacggtcgccgacgcccgctggcgctcagccgccaac
gcgctcgatgcattggcgctgccgcatggctggcgcgtggcagaaggcacggccaacagc
ttcgagcggctgttgaagacgctacgcgacgccggccagttgcgcggcatcgatatcgca
cgcgatcgcaacggatggcggcttaccggggcactgaccgtgggacgccaagcgtcgttg
aaggggatcgtcgacacatggaacaccggtgacaacgcgatgcccgtgcgcatcgagccg
cttccgccacagatcccgacgctggtcgaaacaggcttttccgcgccgctcgtgagcata
ggtggctcgcccaacgcgccgcagatcaccctcgccgacggcacgcgcctggcgcagggg
gcgcgtctgcccggcggcacacgcgtgatcgcgattcatacgggcggcgtgtcgatcggc
tcgcacgaccggcttttctacttacccctgtctccggagacgctgtatgacgattcgcct
gacccagcttga

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