Pandoraea sp. XJJ-1: OYT13_05635
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Entry
OYT13_05635 CDS
T10414
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panx03032
]
OYT13_05635
03036 Chromosome and associated proteins [BR:
panx03036
]
OYT13_05635
03400 DNA repair and recombination proteins [BR:
panx03400
]
OYT13_05635
DNA replication proteins [BR:
panx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OYT13_05635
Chromosome and associated proteins [BR:
panx03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
OYT13_05635
DNA repair and recombination proteins [BR:
panx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
OYT13_05635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
WAL83930
UniProt:
A0A9E9DDV1
LinkDB
All DBs
Position
1223761..1224054
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AA seq
97 aa
AA seq
DB search
MTKSELVNQLAARFPQLVLKDADFAVKTILDAMADALARGHRIEIRGFGSFGLNRRPPRV
GRNPKSGEKVMVPEKFVPHFKPGKELRERVDHKASDQ
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattggtcaaccagttggcggcgcggtttccccagttggtgctcaag
gatgccgatttcgcggtgaagaccattctcgatgcgatggcagacgcgcttgcgcgcggt
catcgaatcgagatccgcggtttcggtagcttcgggctcaaccgtcggccaccgcgtgtc
ggccgcaatccgaagtcgggtgagaaagtgatggtgccggagaaattcgtgccgcacttc
aagcccggcaaggagttgcgagagcgggttgatcacaaggcgtcggaccaataa
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