Pandoraea sp. XJJ-1: OYT13_08325
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Entry
OYT13_08325 CDS
T10414
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00541
Biosynthesis of various nucleotide sugars
panx01100
Metabolic pathways
panx01250
Biosynthesis of nucleotide sugars
Module
panx_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OYT13_08325 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
panx01005
]
OYT13_08325 (kdsA)
Enzymes [BR:
panx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
OYT13_08325 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
panx01005
]
Lipid A
OYT13_08325 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WAL84421
UniProt:
A0A9E9DDY9
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Position
1829661..1830515
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AA seq
284 aa
AA seq
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MKLCGFEVGLDQPFFLIAGTCVVESEQMTIDVAGQLKEITSALGIPFIYKSSFDKANRSS
GKSFRGPGREAGLKILEEVRRQLGVPVLTDVHTEEDVAVAAPIVDVLQTPAFLCRQTDFI
RACAQSGKPVNIKKGQFLAPHDMINVIDKARDAAREAGLPDDVFMACERGVSFGYNNLVS
DMRSLAIMRETRAPVVFDATHSVQLPGGQGTSSGGQREFVPVLSRAAVAVGVSGLFMETH
PDPACALSDGPNAVPLGRMRELLTTLKTIDAAVKQGEFLENNFN
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtgcggtttcgaggttggcctggaccagccgtttttcctgatcgcgggtacc
tgcgtcgtcgaatcggagcaaatgacgatcgacgtcgcgggacagctcaaggaaataacg
agcgcgctgggcattccgttcatttacaagtcgtcgttcgacaaggcgaatcgcagctcc
ggcaagtcgtttcgcggccctgggcgcgaggcgggcctgaagatcctcgaggaagtgcgc
cgccaactcggcgtgccggtgctcaccgacgtgcataccgaggaggatgtggccgtggcc
gcgcctatcgtcgatgtgctgcaaacgccggcgttcctgtgccgccagaccgatttcatt
cgtgcttgcgcccagtcgggcaagccggtgaacatcaagaaggggcagtttcttgccccg
cacgacatgatcaacgtcatcgacaaggcccgcgacgccgcgcgcgaggccggcctgccc
gatgacgtgttcatggcttgcgagcgtggcgtttcgtttggctacaacaatctggtctcg
gacatgcgctcgttggcgatcatgcgcgagacccgggcgccggttgtgttcgacgcgacg
cactcggtgcagttgcccggcggccagggcaccagctcgggcggtcagcgcgagttcgtg
ccggtcctctcgcgtgccgccgtggccgtgggcgtgtcgggcctgttcatggagacgcac
ccggatccggcctgtgcgctttcggacggccccaacgccgtgccgctcgggcgcatgcgc
gaactgctcaccacgctcaagacgatcgatgcggcggtgaagcagggcgagttcctggaa
aataatttcaattga
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