Pandoraea sp. XJJ-1: OYT13_08680
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Entry
OYT13_08680 CDS
T10414
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00020
Citrate cycle (TCA cycle)
panx00190
Oxidative phosphorylation
panx00650
Butanoate metabolism
panx00720
Other carbon fixation pathways
panx01100
Metabolic pathways
panx01110
Biosynthesis of secondary metabolites
panx01120
Microbial metabolism in diverse environments
panx01200
Carbon metabolism
Module
panx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
panx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
panx_M00149
Succinate dehydrogenase, prokaryotes
panx_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OYT13_08680 (sdhA)
00650 Butanoate metabolism
OYT13_08680 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
OYT13_08680 (sdhA)
00720 Other carbon fixation pathways
OYT13_08680 (sdhA)
Enzymes [BR:
panx01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
OYT13_08680 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_8
NAD_binding_7
Lycopene_cycl
ThiF
Motif
Other DBs
NCBI-ProteinID:
WAL84486
UniProt:
A0A9E9DJL4
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All DBs
Position
1898479..1900254
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AA seq
591 aa
AA seq
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MAAIKNSLPRRRFDVVIVGAGGSGMRASLQLAKAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEFMCRQAPNAVYELEHFGMPFDRNADGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHALLHTLYQQNVAAKTHFFVEWMALDLIRNEDG
DVLGVSALELETGEVYLLEAKCTLFATGGAGRVYAASTNAFINTGDGLGMAARAGIPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNSNGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLSHIGAETIMKRLPSIREIALKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYNGQVVVQQNGESTPVNGFYAVGECSCVSVHGANRLGTNSLLDLVVFGRAAGN
HIVDFVKNHGEHKPLPADAGDNAMARLGRLEASSTGEYAQDIANDIRATMQKHAGVFRTS
DLLKEGVDEIKQVAERVSHVHLKDKSKVFNTARMEALEVDNLIEVAKATMIAAEARKESR
GAHAHSDYPERDDANWMRHSLFFSEGNRLDYKPVQLKPLTVDSVPPKARTF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaattaaaaattcgctgccgcgccgccgctttgacgttgtcatcgtgggcgca
ggtggttcgggcatgcgcgcgtcgctgcaactggccaaggccggtctgtcggtcgccgtg
ctgtccaaggtgttccccacccgttcgcataccgtggccgctcagggcggcattggcgcc
tcgctcggcaacatgagcgaagataactggcactaccacttctacgacaccatcaagggc
tccgactggctcggcgaccaggatgcgatcgagttcatgtgccgtcaggcgccgaacgcc
gtctacgaactggaacacttcggcatgccgttcgaccgtaacgcggacggcacgatctac
cagcgcccgttcggcggtcacacggccaattacggcgagaagccggtccagcgcgcttgc
gcggccgccgaccgtaccggtcacgcgctgctgcacacgctgtatcaacagaacgtggcc
gccaagacgcacttcttcgtggagtggatggcgctcgacctgattcgcaatgaagacggc
gacgtgctcggtgtgtcggcgctcgaactcgaaaccggcgaagtctacctgctcgaagcc
aagtgcacgctgttcgcgaccggcggtgccggccgtgtgtacgccgcctcgaccaacgcg
ttcatcaacaccggtgatggtcttggcatggccgcgcgtgcgggcattccgctcgaagac
atggaattctggcaattccacccgactggcgtggccggtgcgggcgtgctgattaccgaa
ggcgtgcgcggtgagggcggtattctgcgcaactcgaacggcgagcgcttcatggagcgc
tatgccccgacgctgaaggatctggcgccgcgtgacttcgtgtcgcgctcgatggaccag
gaaatcaaggaaggccgtggctgcggcccgaacggcgactacgtgctgctcgacctctcg
cacatcggtgccgagacgatcatgaagcgcctgccgtcgattcgcgaaatcgccctgaag
ttcgctaacgtcgacgcgatcaaggaaccgatccccgtcgtgccgaccatccactaccag
atgggtggcattccgacgaactacaacggccaggttgtcgtgcagcagaacggcgaatcg
accccggtcaacggcttctacgccgtgggcgagtgctcctgcgtgtctgtccacggtgcc
aaccgtctgggcacgaactcgctgctcgacctcgtggtgttcggccgcgcggccggtaac
cacatcgtcgacttcgtgaagaaccacggcgagcacaagccgctgcccgccgatgccggc
gacaacgccatggcgcgtctgggccgtctggaagcctccagcacgggcgagtacgcacag
gacatcgccaacgacatccgcgcgacgatgcagaagcacgccggcgtgttccgtacgtcc
gacctgctcaaggaaggcgtggacgagatcaagcaagtggccgagcgcgtgtcgcacgtt
cacctgaaggacaagtcgaaggtgttcaacacggcgcgcatggaagcgctggaagtggac
aacctgatcgaagtggccaaggccaccatgatcgcagccgaagcccgcaaggaaagccgt
ggcgcgcacgcgcacagcgattatccggagcgtgacgacgccaactggatgcgccactcg
ctgttcttcagcgaaggcaaccgtctggattacaagccggtgcagttgaagccgctgacc
gtcgactcggttccgcccaaggcgcggacgttctaa
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