Pandoraea sp. XJJ-1: OYT13_08945
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Entry
OYT13_08945 CDS
T10414
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx03030
DNA replication
panx03430
Mismatch repair
panx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OYT13_08945 (dnaX)
03430 Mismatch repair
OYT13_08945 (dnaX)
03440 Homologous recombination
OYT13_08945 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panx03032
]
OYT13_08945 (dnaX)
03400 DNA repair and recombination proteins [BR:
panx03400
]
OYT13_08945 (dnaX)
Enzymes [BR:
panx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OYT13_08945 (dnaX)
DNA replication proteins [BR:
panx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OYT13_08945 (dnaX)
DNA repair and recombination proteins [BR:
panx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OYT13_08945 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_18
TsaE
AAA_2
DUF3646
nSTAND3
PIF1
AAA_28
AAA_19
AAA_assoc_2
RsgA_GTPase
Herpes_Helicase
Glyco_tranf_2_5
SKI
Rad17
Motif
Other DBs
NCBI-ProteinID:
WAL84532
UniProt:
A0A9E9DGW9
LinkDB
All DBs
Position
1959660..1961621
Genome browser
AA seq
653 aa
AA seq
DB search
MTYQVLARKWRPKGFSTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
ALNCETGITAEPCGVCKACRAIDEGRFVDYVEMDAASNRGVDEMTSLLEKAVYAPADARF
KVYMIDEVHMLTGHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLTTILGEEGIENETQALRLLAKAAGGSMRDALSLTDQAIAYAAGPLTETAVRGM
LGAIDQSVLVRLLDALNDESRTDLLAVADEMAERSFSFAAGLQDLGSLLHKIALAQYAPQ
AVSDEWPEAADVRRLAQALSPEAVQLYYQIATRARGDLGLAPDEYTGFSMALLRMAAFTP
LLAGGTLAEPPTPQTAGAARAVTPAAAPSRTPMAETGRASPSSAASASSASPASAASVAS
SAVSPPAAPAAQPEARRAPSARSSAPADGAPMSPARAALAALNAGRKGTAGRAAGGAGAN
RGSASRASDEAPAGADPEPEPAGAAGALAAASAATPRACVYRESDGVAPVFTGEWPALAA
GLPARGLAQQLAFQSELTEVAGRALHLRVPLRQLADAATTDKLRQTLSEHFGAEVQLHVE
LGQVGTTAASLAAQAAAARQSAAEQAIADDPLVRELIDEFDAQILPGSVRPLQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagtactcgcgcgcaaatggcgccccaaaggcttctcgaccctggtgggc
caggagcatgtcgtgcgtgcgttgacgcacgcgctcgagcaacagcgtttgcatcacgcc
tacttgtttaccggcacgcgtggcgtgggcaagacgacgctctcgcgcattctggccaag
gcgctcaattgtgagacgggcatcacggccgagccgtgtggcgtgtgcaaggcctgccgg
gccatcgacgaagggcgcttcgtcgactacgtggaaatggacgcggcatcgaatcgcggc
gtcgacgaaatgacgtcgctgctggaaaaagccgtctacgcgccagcggatgcgcgcttc
aaggtctatatgatcgacgaagtgcacatgctgacggggcacgcgttcaacgcgatgctc
aagacgctggaagaaccgcccgcgcacgtcaaattcatcctggcgacgaccgatccgcag
aagattccggtcactgtgctctcgcgctgcctgcaattcaatctcaagcagatgccggcc
gggcacatcgtgtcgcacctcacgaccatcctcggcgaggaaggcatcgagaacgagacg
caggcgttgcgtctgctcgccaaggcggcgggcggcagcatgcgcgacgccttgtcgctc
accgatcaggccatcgcctatgccgcgggtccgctgaccgagacggccgtacgcggcatg
ctcggggccatcgatcagagcgtgctcgtgcgtctgctcgacgcccttaacgacgaatcg
cgcaccgacctgctggccgttgccgacgaaatggccgagcgcagtttctcgtttgcggcg
ggattgcaggatctcggcagcttgctgcacaagattgctctggcgcaatacgccccccag
gccgtgtcggacgaatggccggaagcggcggacgtgagacgtctggcgcaggcgttgtcg
cctgaagccgtccaactgtattaccagatcgccacgcgtgcgcgtggcgatctgggactt
gcgccggacgaatacaccggtttttcgatggcgctgctgcgaatggcggcgttcacgccg
ttgctcgcgggcggcacgctggcggaaccgccaacgccgcagacggcgggtgccgcgcgg
gctgtgaccccagcggccgcgccgtcgcggaccccgatggcggaaacggggcgtgcgtcc
ccatcgtctgcagcatcggcttcatcggcttcgcccgcgtcagccgcttccgtggcatcg
tcggcggtctcgccgcctgccgcgccggccgcccaacccgaggcacgccgtgccccgtcg
gcgcgaagcagtgcgccggccgatggcgccccgatgtcgcccgcccgcgcggcccttgcc
gccctcaatgctggacgcaagggcacggcaggacgcgctgccggcggcgcaggcgccaat
cgcggaagcgcgtcgcgcgcctccgacgaggcgccagccggtgccgacccggagcccgag
cctgcaggggctgccggtgcgttagcggcagcgtctgcggcgaccccgcgtgcttgcgtc
tatcgtgaatccgacggtgtcgcaccggtctttaccggcgaatggccggcattggccgcc
ggtctcccggcacgcggtcttgcccaacaactggcatttcaaagcgagttgaccgaagtc
gccggtcgcgcgttgcatttgcgcgtgccgctccggcagttggccgatgcggccaccacc
gacaagctgcgtcagacgctgtctgagcacttcggcgccgaggtgcaattgcatgtcgag
ctggggcaggtggggacgacagcggcttcgctcgccgcgcaagcggcggcggcgcgccag
agcgcggcggaacaggcgatcgcggacgatccgctcgtgcgcgaactgatcgacgaattc
gacgcccagattctgccgggcagcgttcgcccgttacaataa
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