Pandoraea sp. XJJ-1: OYT13_09725
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Entry
OYT13_09725 CDS
T10414
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
panx03016
]
OYT13_09725 (truB)
Enzymes [BR:
panx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OYT13_09725 (truB)
Transfer RNA biogenesis [BR:
panx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OYT13_09725 (truB)
Prokaryotic type
OYT13_09725 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WAL84664
UniProt:
A0A9E9DGQ2
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All DBs
Position
2130804..2131790
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AA seq
328 aa
AA seq
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MTDPRSQAPRQKLPRFALDGVLLLDKPLGMSSNDALIRAKRLLQALKAGHTGTLDPLATG
LLPLCFGEATKFSQDLLEADKTYEALVRLGETTTTGDAEGEVLQTRPVTVDEAAIRAVLP
RFTGPISQVPPMYSALKRDGKPLYEYARAGQTLEREARAVTILALEMTACALPAVAEFSF
RVTCSKGTYVRTLAEDIGEALGCGAHLRALRRTAVGPLTLDGAVTLEDLGALDHAQRVQR
LAPVDALLKTLPTIWLDETLARRFSHGQRLRLDEARCPQALRACAGASEAIEVKVYAEAD
GDAAVRLLGVARLDGEALLTPQRLLKTQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccgcgttcgcaggcaccccgccaaaaacttccccgtttcgcgctcgatggc
gtgttgctcctggacaagccgctgggcatgtcgtccaacgacgcgttgatccgggccaag
cgattgctgcaggcgttgaaggcggggcataccggcacgctcgatccgttggcgaccggt
ctgttgccgctttgtttcggcgaggcgacgaagttctcgcaggacttgctcgaagccgac
aagacctatgaagcgctggtgcggcttggcgagaccacgaccaccggcgacgccgagggc
gaggtgttgcaaacgcgccctgtgacggtggacgaagcggcgattcgcgcagtgctgccc
cgcttcacggggccgatctcgcaggtcccgccgatgtattcggcgctcaagcgagacggc
aagccgttgtacgaatatgcgcgcgcggggcagacccttgagcgcgaagcgcgcgcggtc
acgattctcgcgttggagatgacagcgtgcgcgttgccggccgtcgccgagttctcgttt
cgcgtgacttgcagcaaaggcacgtacgtgcggacgttggccgaagatatcggtgaggcg
ctgggctgcggcgcgcatttgcgcgcgctgcgccgcacggccgtcggtccgctcacgctc
gacggcgcggtgacgctggaagatttgggggcgctcgatcacgcgcaacgtgtgcagagg
ctggcaccggtcgatgcgttgctcaagacgctgccgacgatctggctcgacgaaacgctc
gccaggcggttcagccacggacaacgtctgcgtctggacgaggcgcgctgtcctcaggcg
ctgcgcgcgtgcgccggggcgtccgaggcgatcgaggtgaaggtgtatgccgaagccgat
ggcgacgccgccgtgcggttgctcggcgttgcgcgactcgatggcgaggcgctgctcaca
ccgcaacggctgttgaagacccagtaa
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