Pandoraea sp. XJJ-1: OYT13_10050
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Entry
OYT13_10050 CDS
T10414
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panx03400
]
OYT13_10050 (radA)
DNA repair and recombination proteins [BR:
panx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OYT13_10050 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
GvpD_P-loop
AAA_16
ChlI
Lon_C
AAA_24
nSTAND3
RecA_N
nSTAND_NTPase5
AAA_14
AAA
SLFN-g3_helicase
NTPase_1
B12-binding
NACHT
AAA_5
CobU
MCM
PAXNEB
AAA_28
Isochorismatase
DUF7129
AAA_19
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WAL84724
LinkDB
All DBs
Position
2201194..2202567
Genome browser
AA seq
457 aa
AA seq
DB search
MAKAKTVYICTECGGQTPKWAGQCPHCNGWNSLVESVAEAPTGHRYQSLAKSTPVRKLAQ
IEAADVPRFSSGVSEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQSLAHLARERRALYV
SGEESGAQIALRAQRLGLGAAGEGGGELDLLAEIQLEKILGAIESEKPDVVVIDSIQTVY
SEALSSAPGSVAQVRECAAQLTRSAKQSGVTVIMVGHVTKEGSLAGPRVLEHIVDTVLYF
EGDTHSSYRLVRAFKNRFGAVNELGVFAMTEKGLRGVANPSALFLSQHEQSVPGSCVLVT
QEGTRPLLVEVQALVDTAQVPNPRRLAVGLEQNRLAMLLAVMHRHAGIACFDQDVFLNAV
GGVKISEPAADLAVLLAIHSSLRNKPLPRGIVAFGEVGLAGEIRPSPRGQDRLKEAAKLG
FSIAIIPKANAPKQPIDGLEVHAVDRLEHAISVVAGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccaagactgtctatatttgtaccgaatgcggcgggcagacgcccaagtgg
gcggggcagtgtccccactgcaacggctggaattcgctcgtcgaatcggtggcggaagcg
ccgacaggtcatcgataccaatcgctcgccaagagtacgcctgtgcgcaagctcgcgcag
atcgaggcggccgatgtgccgcgcttctccagcggcgtgagcgaattcgaccgcgtgctg
ggcggcggtctggttgccggcggcgtggtgctcatcgggggagatcccgggatcggcaag
tcgacgctgctgcttcagtcgcttgcacatctggcgcgcgaacggcgtgcgctgtatgtg
agcggcgaagaatcgggcgcgcagattgccttgcgtgcgcagcgcctgggcctcggcgcc
gcgggcgagggcggcggggaattggatttgctggcggaaatccagctcgagaagattctg
ggcgccatcgagtcggagaagcccgacgtggtcgtgatcgactcgatccagacggtctac
tcagaagcgctcagttcggcgccgggatcggtcgcgcaggtgcgcgaatgcgcggcgcaa
ctcacgcgcagcgccaagcagagcggcgtaacggtgatcatggttggccacgtaaccaag
gaaggcagtctcgccgggccgcgcgttctcgaacacatcgtcgacacggtgctgtatttc
gagggcgatacgcactcgtcgtaccggttggtgcgggcgttcaaaaatcgcttcggtgcc
gtcaacgagttgggcgtgtttgcgatgacggagaaaggcctgcgcggcgtggcgaatccg
tcggccttgttcctctcgcaacatgagcaaagcgtgccgggctcgtgcgtgctcgtcacg
caggaaggcacgcgcccgctgctcgtcgaggtgcaggcgctggtcgacacggcgcaggtg
cccaatccgcggcgtttggccgtggggctggagcagaaccggctggccatgttgctcgcc
gtgatgcatcgtcatgcgggcatcgcctgtttcgatcaggatgtgttcctgaacgccgtc
ggcggcgtgaagatctcggagccggcggccgatctggccgtattgctggcaattcattcg
tcgctgcgcaacaagccgttgccgcgcggcatcgtggcattcggcgaggtcgggctggcg
ggcgaaatccggccgagcccgcgcggtcaggatcgtctcaaggaagccgccaaactgggc
ttttcgattgcgatcatcccgaaggcgaatgcgccgaagcaacccatcgacggcctcgaa
gtgcatgccgtcgaccgtttggagcacgcgatttccgtcgtggcggggttgtag
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