Pandoraea sp. XJJ-1: OYT13_12115
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Entry
OYT13_12115 CDS
T10414
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panx03000
]
OYT13_12115
Transcription factors [BR:
panx03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
OYT13_12115
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
MarR_2
MarR
Motif
Other DBs
NCBI-ProteinID:
WAL85080
LinkDB
All DBs
Position
complement(2654980..2655768)
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AA seq
262 aa
AA seq
DB search
MYASFRPLDPAPEAYAQSIRVHRAFNDIDDGVPRCSTCLLRQLCLPEGLSDASARGLDGV
TRVRRTIRRGEVLFRPGDPLEHLYAVRAGSFKTVIMHPDGREQVTGYMMGGELLGLGAIA
SGRQVSEAVALEDSQVCAIKFADLEAAAGQVPMIMRQMHRLIAAGIVREQNQLLRLGTAR
GEARLASFLLDVSARLAARGYSPSSFLLRMTREEIGSYLGLQLETVSRMLSRMQAQNALR
VRQREITLLDTKRLGEMAALSH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcttccttccgcccgctcgatcccgcccccgaggcttacgcacagagcattcgc
gtgcatcgggcattcaacgatatcgatgacggtgtgccccggtgcagcacctgcctcctg
cgtcagctctgcctgccggaaggcctttccgatgcatctgctcgcggcctggacggcgtg
acccgggtgcgtcgtaccattcgccgcggtgaagtgctgtttcgaccgggcgaccctctc
gaacatctgtacgccgtgcgtgcgggctcgttcaaaacggtcatcatgcatccggacggc
cgggaacaagtcacggggtacatgatgggcggggagctgcttgggctgggcgccatcgcc
agtggccggcaggtgtcggaagcggtggcgctggaggatagccaggtctgcgcgatcaag
ttcgcggatctggaagccgctgcgggacaagtgcccatgatcatgcgacagatgcatcgg
ttgatcgcggcaggcattgtgcgagagcagaaccagttattgcgcctgggcaccgcgcgc
ggcgaagccagattggccagcttcctgctggacgtctcggcgcggctcgccgcacgcggg
tactctcccagttcgttcctgctgcgcatgacgcgcgaggagattggcagctacctcggc
ctgcagttggaaacggtcagtcgaatgctctcgcgcatgcaggcgcagaatgcgctgcgc
gtcaggcaacgcgaaatcacgctgctcgataccaagcgccttggcgagatggcggccctg
tcgcattag
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