Pandoraea sp. XJJ-1: OYT13_12595
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Entry
OYT13_12595 CDS
T10414
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panx02000
]
OYT13_12595
01504 Antimicrobial resistance genes [BR:
panx01504
]
OYT13_12595
Transporters [BR:
panx02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OYT13_12595
Antimicrobial resistance genes [BR:
panx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OYT13_12595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
YpfK
Motif
Other DBs
NCBI-ProteinID:
WAL80735
LinkDB
All DBs
Position
2762035..2765235
Genome browser
AA seq
1066 aa
AA seq
DB search
MSPQDGKPPVPAASPAAPPAAPKDYRHEEGRFNLSAWALRHRALVIFLIAMATIFGILAY
SRLAQSEDPPFTFRVMVIRTYWPGATAKQVQEQVTDRIARKLQEMPAIDFQRSYSRPGES
LLFFSMKDSAPASDVPEEWYQVRKKVGDIAYTLPQGVQGPFFNDEFGDVYTHIFTLQGDG
FGPAQLRDYADSLRTVLLRVPGVAKVDYFGDQEQRIYVEINNTQLTRLGISPNQIAQAVG
AQNAVSPAGTIDTPNDRLVVRPSGQFRSVADLADTLIRVNNRSFRLGDIATIKRGYVDPP
VSEMRFGGKPVLGIGITMQKGQDVVHLGKALAGKMGELRAQLPAGLTLTEVASMSKSVSQ
SVDDFLEAVAEAVAIVLIVSLVSLGLRTGMVVAISIPVVLAVTSLFMYLFDIGLHKVSLG
TLILALGLLVDDAIIAVEMMAVKLSQGWNRKRAAAFAYTSTAFPMLTGTLVTVSGFLPIA
LAKSSTGEYTRSIFEVSAIALLASWLAAVVLIPLLGYKLLPERAREAHHGDDHEHEVYDT
RFYNRLRGWLTWCIERRLIVLAITVVLFLISMAGFSLVPQQFFPSSDRPELMVDLRLPEG
ASYQATLRETQRLEKLLKGRKEIDHTVSFVGTGAPRFYLPLDQQLPTPNFAQLVVTAKSV
DDREALAQWLEPTLREAMPGVRTRLSRLENGPPVGFPVQFRVSGDDIGTVRKIAEQVAAV
MRKNGDTADVQFDWDEPSQRSVHFEVDQQKARALGVSSTDISNFIAMTLTGYDISQYRER
DKLISITLRAPKAERVDPAKLATLAMPTPNGPVPLATLGHVVNDLEYGVIWERDRQPTLT
VRSDVRAGKQGIDVTDAVDRSLGDIRKALPVGYRIEIGGSVEESAKGQSSIMAQMPIMII
AVLTLLMIQLQSFARTLLVVLTAPLGMIGVVATLLLFGKPFGFVAMLGVIAMFGIIMRNS
VILVDQIEQDIAAGHPRFDAIVSATVRRFRPITLTAAAAVLALIPLLRSNFFGPMATALM
GGITSATILTVFFLPALYATAFRVRHDERASPADPAHAANPQGDRA
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcaggacggcaagccgcctgtgcccgcggcatcccccgccgcgccgcccgcc
gcacccaaggactatcgtcacgaggagggccggttcaatctctccgcatgggccctgcgg
catcgcgcgctcgtgatcttcctgatcgcgatggccacgatcttcggcattctggcctac
tcgcgcctcgcgcaatcagaagatccgcccttcacgttccgcgtgatggtcatccgcacg
tactggccgggcgcgaccgccaaacaggtgcaggagcaggtcaccgaccggatcgcgcgc
aagctccaggagatgccggcgatcgacttccaacgcagctattcacgccctggcgagtcg
ctgctgtttttttcgatgaaggattcggcgcccgcgagcgacgtgccggaagagtggtac
caggtgcgcaagaaggtcggcgacatcgcgtacaccttgccgcagggcgtgcaaggaccg
ttcttcaacgatgaattcggcgacgtctacacgcacatcttcacgctccagggcgacggc
ttcggtcccgcccagttgcgcgattacgccgactcgctacgcaccgtgctgctgcgcgtg
cctggcgtggcgaaggtcgactacttcggcgaccaggagcagcgcatctatgtcgagatc
aacaacacgcaactgacgcgactcggcatttccccgaaccagatcgcgcaggccgtgggc
gcgcagaacgcggtctcgcccgcgggcacgatcgacacgcccaacgaccggctggtcgtg
cgcccgagcggccagttccgcagcgtggctgaccttgccgacacgctcatccgcgtgaac
aaccgatctttccggctgggcgacatcgccacgatcaagcgcggctatgtcgacccgccc
gtctcggagatgcgcttcggtggcaagcccgtgctcggcatcggcatcaccatgcaaaag
gggcaggacgtcgttcaccttggcaaggcgctggccggcaagatgggcgagctgcgtgct
caattgcccgcaggcctcacgctcactgaagtcgcgagcatgtcgaagtccgtgtcacag
tccgtcgacgacttcctcgaagcggtggccgaagccgtcgccatcgtgctcatcgtgagc
ctcgtctcgcttggcttgcgcaccggcatggtggtggccatttcgattccggttgtcctc
gccgtgacgtcgctgttcatgtacctcttcgacatcgggctgcacaaggtgtcactcggc
acgttgatcctggcgctcgggctgttggtggacgacgccatcatcgctgtcgaaatgatg
gccgtgaagctctcccaaggctggaatcgcaagcgtgcggccgccttcgcctacacgagc
acggcgttccccatgctgaccggcacgctcgtgaccgtgtccggctttctgcccattgcc
ctggcgaagtcgagcacgggtgaatacacacgctcgatcttcgaggtctcggccattgcg
ctgctcgcctcgtggctggccgcggtcgtgctcattccgctgctcggctacaagctgttg
cccgagcgagcccgcgaggcccatcacggcgacgatcatgagcacgaggtctacgacacc
cgcttctacaatcgcctgcgcggctggctgacatggtgcatcgagcgccgcttgatcgtg
cttgccatcaccgtcgtgctgttcctgatttcgatggccggcttttcgctcgtaccccag
cagtttttcccgagttccgatcggcccgaactgatggtcgatctccgtctgccggaaggg
gcgtcgtatcaagcgacactgcgcgaaacgcaacgtctggaaaaattgctcaagggtcgg
aaagagatcgatcacacggtgagctttgtcggcaccggcgcgccccgcttctatctgccg
ctcgatcagcaactgcccacgccgaacttcgcgcaactggtggttaccgccaagtccgtg
gacgatcgcgaggcgctcgcccaatggctcgagccgacgctgcgcgaggccatgcccggt
gtgcgcacccggttgtcgcgactggaaaacggaccgcccgtcggctttcccgtacagttt
cgcgtgagcggcgacgacattggcacggtgcgcaagatcgccgagcaggtggcggccgtc
atgcgtaagaacggtgacaccgccgacgtccagttcgactgggacgagccctcacaacgc
tcggtgcactttgaagtcgaccagcagaaagcacgcgcactgggcgtgagttcgacggat
atctcgaacttcatcgccatgacgcttacgggctacgacatcagccaataccgcgaacgc
gacaagctgatctcgatcacactgcgcgcgcccaaggccgagcgggtggatccggcgaag
ctcgccacgctcgccatgcccacgccgaacggcccggtgccgttggccacgctggggcat
gtggtgaacgacctggaatatggcgtgatctgggagcgcgaccggcagccgacgctcacc
gtgcgctcggatgtacgcgcgggcaagcaggggatcgacgtgaccgacgccgtcgaccga
tcgctcggcgatatccgcaaggccctcccggtgggttatcgcatcgagatcggcggatcg
gtcgaggagtccgccaagggacagtcctcaatcatggcgcagatgccgatcatgatcatc
gcggtgctcacactcctgatgatccagctccagagcttcgcgcgcaccttgctcgtggtg
ctcacggccccgctcggcatgatcggcgtggtcgccacgttgctgctgttcggcaagccg
ttcggtttcgtggcaatgctcggcgtgatcgcgatgttcggcatcatcatgcgaaactcg
gtgatcctggtcgaccagatcgaacaggacatcgccgcgggacacccgcgcttcgacgcc
atcgtgagcgccacggtgcggcgcttccggccaatcacgctcacggccgccgccgccgtg
ctcgcgctgatccctttgctgcgcagcaacttcttcggcccgatggccacggcgttgatg
ggcggcattaccagcgccacgatcctgaccgtgtttttcctgccggcgctgtacgccacg
gcattccgcgtgcgtcacgacgaacgtgcctcgcccgccgaccccgcacacgcggccaac
ccgcaaggagaccgcgcatga
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