Pandoraea sp. XJJ-1: OYT13_13190
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Entry
OYT13_13190 CDS
T10414
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00061
Fatty acid biosynthesis
panx00071
Fatty acid degradation
panx01100
Metabolic pathways
panx01212
Fatty acid metabolism
panx02024
Quorum sensing
panx04146
Peroxisome
Module
panx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OYT13_13190
00071 Fatty acid degradation
OYT13_13190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OYT13_13190
09145 Cellular community - prokaryotes
02024 Quorum sensing
OYT13_13190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
panx01004
]
OYT13_13190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
panx04147
]
OYT13_13190
Enzymes [BR:
panx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OYT13_13190
Lipid biosynthesis proteins [BR:
panx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OYT13_13190
Exosome [BR:
panx04147
]
Exosomal proteins
Exosomal proteins of breast milk
OYT13_13190
Exosomal proteins of breast cancer cells
OYT13_13190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WAL80842
UniProt:
A0A9E9D9W0
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All DBs
Position
2909198..2910913
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AA seq
571 aa
AA seq
DB search
MDSAVQHERVWLDAYPPGVPADIDTTRYTSLVQAFDEWIDKYRERIAFVSLGSEITYGEV
ARQAYAFAAWLQAHGVQKGERVALMMPNCFQYPIGLFGTLIAGAVVVNVNPLYTVRELKH
QLQDSGARTIVAFENFAKTVQDAIPGTEVRHVLVTQIGDLLGTGLNVKGRLVNFLMRRIA
KQVPPYDLPQAIPLRRALAEGAKHTPAPVPLARDDLAFLQYTGGTTGVAKGAMLTHGNVL
ANLLQTEAWAAGQLDGDIEVNLSLLPMYHILSLTVNCLVFMSLGGRNILIANPRDVKKVV
YIIRNETFTGVTGVNTLFNGLLENQDFCARDFSRLKLSLAGGMATQRAIAERWKQVTGKP
IIEGYGLTECSPIVTMNPVDLSHMDEVDFTGSIGLPAPSTDVRFKRDDGTWADLGEPGEL
CVRGPQVMRGYWQRPEDTANTFDADGWLMTGDVGVMDARGYVRLIDRKKDMILVSGFNVY
PNEIEDVVMLHPGVREAAVVGVPDPVAGERVKLVVVAKDPGVTTEILLAHCREHLTAYKV
PRIVEFRDGELPKSTVGKILRRELRAPLGHA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggactcagctgttcagcacgaacgcgtgtggctagatgcttacccgcctggcgttccc
gccgacatcgatacgacacgctacacgtcgctggtgcaggcgttcgacgaatggatcgac
aagtaccgcgaacgcattgcgttcgtgagtctggggagcgaaatcacctatggcgaggtc
gcccgccaggcgtatgcctttgccgcgtggctgcaagcccacggcgtgcagaagggagag
cgcgtggcgctcatgatgcccaattgcttccagtacccgatcggcctgttcggcacgctg
atcgccggggccgtggtcgtcaacgtcaatcccctgtacaccgttcgcgaactcaaacat
caattgcaggacagcggcgcacgtacgatcgtcgcgtttgagaacttcgcgaaaaccgtg
caggacgcgatccctggcaccgaggtgcgccacgtgctcgtcacgcagatcggcgacttg
ctcggcaccggcctgaacgtcaagggacgcctcgtcaacttcctcatgcggcgaatcgcg
aagcaagtgccgccctacgatcttccgcaggcgatcccgctgcgccgagcgctcgccgag
ggcgcaaagcacacgcctgcgccggtgcccctcgcgcgcgacgacctcgccttccttcaa
tacacggggggcacgaccggcgtggccaagggggcgatgctgacgcacgggaacgtgctg
gccaacctgttgcaaaccgaggcatgggccgccggccagctcgacggggacatcgaggtg
aatctgtcgctgctgcccatgtatcacatcctgtcgctcacggtgaactgcctggtgttc
atgagcctgggggggcgcaacatcctgattgcaaatccgcgcgatgtgaagaaagtcgtc
tacatcatccgcaacgagacattcaccggcgtcacgggcgtgaacactctgttcaacggt
ctgctcgagaaccaggacttctgtgcgcgcgacttctcccggctgaagctctcgcttgcc
ggtggcatggcaacgcaacgtgccattgccgagcgatggaaacaggtcaccggcaagccg
atcatcgagggctacggcctcaccgaatgctcgcccatcgtcacgatgaacccggtcgac
ctctcgcatatggacgaggtcgatttcaccggatccatcggtctgcccgccccgtcgacc
gacgtgcgcttcaagcgcgatgacggcacgtgggccgatctcggcgagccgggggagtta
tgcgtgcgggggccgcaagtcatgcgcggctattggcagcgcccggaagacactgccaac
acgttcgacgccgacggctggctgatgacaggtgacgtcggcgtgatggacgcgcgcggt
tacgtacggctcatcgaccgcaagaaggacatgattctcgtgtcgggtttcaacgtctac
ccgaacgaaatcgaggacgtcgtgatgcttcacccaggggttcgggaagccgcggtggtc
ggcgtgcccgatccggttgccggcgagcgcgtaaagctcgtggtcgtcgcaaaagacccc
ggggtgaccaccgagattttgctcgcccactgccgcgaacacctgacggcgtacaaggtg
ccgcgcatcgtcgaattccgtgacggcgaactgcccaagtcgaccgtcggcaagattctg
cggcgcgaactgcgcgcgccgctcggtcacgcgtaa
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