Pandoraea sp. XJJ-1: OYT13_13995
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Entry
OYT13_13995 CDS
T10414
Name
(GenBank) DUF3820 family protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OYT13_13995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panx03400
]
OYT13_13995
DNA repair and recombination proteins [BR:
panx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OYT13_13995
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GFIT
Motif
Pfam:
QSregVF_b
RNase_T
DUF570
Motif
Other DBs
NCBI-ProteinID:
WAL80986
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Position
3073706..3074383
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AA seq
225 aa
AA seq
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MSAYIFDTETTSANDPHLIEAGWLAMSDDVAVHAPRDVFLQRYSTDQSITFGAMAVHHIL
PSDLVGSPPNTEFRLPNDIKYMIGHNVDFDWKVTGSLNVKRICTLAMARFLWSEADSHTL
GALSYMLSTDLESVRLELRDAHNALADCYLCARVLFSIIEHCGEDMKTWEDVYQFSERAR
IPTRMPFGKHAGTPIKDIPYDYRAWLLRQPDVDPYLRKALETQTA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctatatcttcgacaccgaaaccacgagcgccaacgatcctcacttgatcgag
gcgggctggctggcaatgagcgatgacgttgccgtgcacgcaccgagagacgtcttcctt
cagcgatacagcactgaccagtcgatcaccttcggcgcgatggccgttcatcacatcttg
ccgtccgatctggttggatcgccgccaaataccgaattccgtttgccgaacgacatcaag
tacatgattgggcacaacgtcgacttcgactggaaggtgactggctcgctcaacgtcaag
cgaatttgtaccctcgcgatggcacgttttctgtggtcggaagcagattcgcacacgctt
ggtgctttgagttacatgctgtcgaccgatcttgaatcagtgcgccttgaacttcgtgac
gcgcacaacgcactggccgactgctatctctgcgctcgcgttctgttctcgatcatcgag
cattgcggcgaagacatgaagacatgggaagacgtttatcagttctccgaacgtgcacgc
atcccgacccgcatgcccttcggcaaacacgcgggcacgccgatcaaggacatcccctac
gactaccgcgcgtggctattgcgccaaccggacgtagacccatacctgcgcaaagctctc
gagacgcagacagcctga
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