Pandoraea sp. XJJ-1: OYT13_15255
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Entry
OYT13_15255 CDS
T10414
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panx03000
]
OYT13_15255 (prpR)
Transcription factors [BR:
panx03000
]
Prokaryotic type
Helix-turn-helix
Other families
OYT13_15255 (prpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
PAS
PAS_8
AAA_16
AAA
Mg_chelatase
AAA_2
AAA_7
DUF6262
HTH_7
AAA_22
PAS_9
HTH_23
TIP49
HTH_30
AAA_3
NACHT
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WAL81216
UniProt:
A0A9E9DCR6
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All DBs
Position
3332026..3334155
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AA seq
709 aa
AA seq
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MPNFSPAIPPRLSTAAPSAARAGFAQPVTAVRKPVIWAVGISKLGELYRDIVPDYAAQAE
VQIIDKGYEAVIEALERLPAGSVDGIVAAGSNGAFLRERLALPVVLVKVTGFDVMHALAR
ARRARPAPSPASRIALVSYARPAPEFERFKSAFHLDISQHAYFDRHDAEDLVHRLRDEGI
EVIVGPGLVTELAERAGLAGVFLYSQDSVRAAFDTALEVARFGRIEAQRRERLDTVLRHL
HEGVAAVDLNGRIEAINAPMAGMLGVSVADAVGRPLDAIAPALDVARTLESASAELEAIV
SMAGKTWVINRIPLLDQGTLTGALLTCQDSQSFARVDRSLRSRHRPRHLVARYRLDDLIG
DSDAMSQVRALARRYAQTDSTVLVHGESGTGKELLAQGIHNASRRRDYPFVAINCAAFPE
TLLESELFGYEDGAFSGARRGGKAGLFETAHNGTIFLDEIGEMPMPLQTRLLRVLQEREV
LRLGATEPVPCDVRVIAATHRDLRQRVAAGGFREDLYYRLNILRMVLPALRERMEDLPRL
TPLFLERALARAGARMSVEALQASLMPLLATYRWPGNVRELENLLERIAVVCADVVDAHE
ISRARLVEIAPELGAMTDELGTPMPPDVINTTNGREFGAHDTHRARVPGVETSRSASAPL
TGRARRAAEDLARIHATLAACGGDRGAACEALGISRSTLWRKLRDTVDG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttctcccccgcgataccccctcgcctgtcgacggcggctccgagcgccgcg
cgcgcggggtttgcgcaaccggtcaccgccgttcgaaaacccgtgatctgggccgtgggc
atcagcaagctcggcgagttgtaccgcgacatcgtgccggactacgccgcgcaagccgag
gtgcagatcatcgacaaaggctatgaagccgtcatcgaagccttggagcgcctgcccgcg
ggcagtgttgacggcattgtcgccgctggctcgaacggtgccttcctgcgcgagcgcctt
gccctgcccgtggtgctcgtgaaagtgacgggcttcgacgtgatgcatgcgctggcacgg
gcgcgccgcgcgcggcctgcgccctcgcccgcgtcgcgtatcgcgctggtgtcgtatgcc
cgacccgcgccagaatttgagcgcttcaagagcgcgttccacctcgacatctcgcaacac
gcctatttcgaccgccacgatgcggaagaccttgtgcaccggctgcgcgacgaaggcatc
gaggtcattgtcggccccgggctggtgactgaactggccgagcgagccggactcgcgggc
gtctttctctattcgcaggattcggtgcgcgccgcgttcgacacggcactcgaagtcgcg
cgcttcggacgcatcgaagcgcaacgccgcgagcggctcgataccgtgctgcgacacttg
cacgaaggggtcgctgccgtcgatctgaacgggcgcatcgaagcgatcaacgccccgatg
gcgggcatgctcggcgtgagcgttgccgatgcggtcggccgtccgctcgatgccatcgcc
ccggcgctcgacgtcgcgcgcacgctggagagcgcgagcgccgaactcgaggccattgtc
tcgatggctggcaaaacgtgggtcatcaatcgcattcccttgctcgaccagggcacgctc
acgggcgcgctgctgacgtgccaggactcgcagtcgtttgcgcgcgtggatcgctcgcta
cgctcgcgccatcgcccacgccatctcgtggcacgctatcgcctcgacgatctgatcggc
gattccgacgcgatgtcgcaggtgcgtgcattggcacgccgctacgcccagaccgactcg
accgtactcgtccacggcgagagcggcaccggcaaggagctgctcgcacaaggcattcac
aatgccagtcgacggcgcgactatccgttcgtcgccatcaactgcgcggcgtttccggaa
acgctgctcgagagcgaactgttcggctatgaggacggcgccttctcgggcgcgcggcgc
ggcggcaaggcggggttgttcgagacggcgcacaacggcaccatttttctcgacgaaatc
ggtgaaatgccgatgccgctgcaaacgcgtctgttgcgggtgctgcaggagcgcgaggtg
ctgcgacttggcgcgaccgagcccgtgccctgcgacgtgcgcgtgattgcggccactcac
cgcgaccttcgccagcgggtggccgccggggggttccgcgaagacttgtactaccggctc
aacatcctgcgcatggtgctgccggcactgcgcgaacgcatggaggacttgccgcgcctc
acccccctctttctcgaacgcgcactcgcccgcgcgggagcgcgcatgagcgtcgaggcg
ctgcaggcgtcgctcatgccgctgctcgcgacctatcgctggccgggcaatgtccgcgaa
ctggaaaacctgctggaacgcattgccgtcgtatgcgcggatgtcgtcgacgcgcacgag
atcagccgtgcaaggttggtcgagattgccccggagttgggcgcgatgaccgatgaactg
ggcacaccgatgccgcccgatgtcatcaacacgaccaacggacgcgaatttggcgcgcac
gacacccatcgcgcccgcgtccccggcgtcgaaacatcacgctcagcgtcagcgccgctg
acaggtcgtgcccgtcgcgcagccgaagaccttgcccgcattcacgccacgttggcggcg
tgcggtggcgaccgcggcgccgcttgcgaggcactcggcatcagccgctccacgctctgg
cgcaaactgcgcgacactgtcgacggctga
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