Pandoraea sp. XJJ-1: OYT13_16245
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Entry
OYT13_16245 CDS
T10414
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
panx01011
]
OYT13_16245
Enzymes [BR:
panx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
OYT13_16245
Peptidoglycan biosynthesis and degradation proteins [BR:
panx01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
OYT13_16245
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
PhnJ
Motif
Other DBs
NCBI-ProteinID:
WAL81394
LinkDB
All DBs
Position
complement(3540929..3542605)
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AA seq
558 aa
AA seq
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MRLIVSLLLTLLLAACAGTAPTNGALSSTPTAQGQSPLATTAKGKQRVSSDQTIDLDSDS
INDLAYGSDDADLWSRIRHGFAIPDLDTDLAQDRTQWYAQRPEYVERMIERSSKYLFHIV
EELERRHMPTELALLPFVESAYNPQALSTAKAAGMWQFIPSTGKTYNLKQNMFQDERRDV
LASTTAALDYLSKLYAMFGDWQLALAAYNWGEGNVQRAIERNQAQGLPTDYLSLRMPTET
RYYVPKLQAIKNIIAHPEIYSVKLPEIPNHPYFVSVTTKRDIDVALAAKLADLPLDEFRA
LNPSFRKPVILGAAQPKILLPFDSAEVFQRRLKGYDKPLSSWTTYTSASRERPEDVARKL
GVDAAVIRSVNNIAPRMRLKAGSTLLVPRSDDIDQDISASVARNAVLALEPDIPDTRKVM
VRARKHDTLARVAQRSGVSVAQIKSWNRLRRDTLTSGQLLVLHVPVKDALRVAAASEAPA
ATGDGEAQRTRLVRGKHGKMIRVVERRPAKAAVADNRTATAKVASKGRAKAPAKTVAKMA
SKPTAKKAPAKVTKTAQR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatcgttagcttgctactgacgctgcttctggcggcgtgtgccggcacagca
ccgaccaacggtgcattgagttccacgccgactgcgcaaggccaatcgcctctcgccacg
acagccaaaggcaagcaacgcgtctcaagcgatcagaccattgaccttgacagcgactcg
atcaacgacctggcctacggcagcgacgacgccgacctctggtcgcgcattcgtcacggt
ttcgcgatccccgatctggacaccgacctcgcgcaggaccgcacgcagtggtacgcgcag
cgtcccgaatacgtcgagcgcatgatcgagcgctcgagcaaatacctgttccacatcgtt
gaagaactcgagcgccgtcatatgccgacggaactcgcgctgctgccgttcgtggaaagc
gcgtataacccgcaggcgctctcgacggcgaaggcggccggcatgtggcagttcattccc
agcacgggcaagacgtacaacctcaagcagaacatgttccaggacgagcgccgcgacgtg
ctcgcctcgacgaccgcagcgctcgactacctctcgaagctctatgcgatgttcggtgac
tggcaactggcgctcgcggcctataactggggcgaaggcaacgtgcagcgtgcgatcgag
cgtaatcaggcgcaagggttgccgaccgattacctgagcctgcgcatgccgaccgagacg
cgttactacgtgccgaagctgcaggcgatcaagaacatcattgcgcacccggaaatctac
agcgtgaagctgcccgagattccgaatcacccgtacttcgtcagcgtgaccaccaagcgc
gacatcgacgtggcattggccgcgaagctggccgacctgccgctcgacgaattccgcgcg
ctcaatccgtcgttccgcaagccggtgattcttggcgcggcacagccgaagattctcctg
ccgttcgatagcgccgaagtgtttcagcgtcgtctgaagggttatgacaagccgctttcg
agctggacgacctacacgtccgcatcgcgtgagcgtccggaagacgtcgcgcgcaagctg
ggtgtcgacgccgcggtcatccgttcggtcaataacattgcgccgcgcatgcgcctcaag
gcgggctcgacgttgctggtgccgcgctcggacgacattgaccaggacatcagcgcgtcg
gtagcacgcaatgccgtgcttgcgctggagccggatattcccgatacgcgcaaggtgatg
gtgcgcgctcgcaagcacgacacgcttgcccgcgtggcccagcgcagtggcgtgagcgtt
gcacagatcaagagctggaatcgtctgcgtcgcgatacgctcacgtcgggccaactgctg
gtgcttcacgtgccggtcaaggacgccttgcgcgtggcggctgcgtccgaggccccggcg
gccacgggcgacggcgaagcgcagcgtacgcgtctggtgcgcggcaagcatggcaagatg
atccgcgtggtggagcgtcggccggccaaggctgccgtcgctgacaataggaccgcaacg
gccaaggtggcatcgaaggggcgggcgaaggcccctgcgaagacagtcgccaagatggct
tcgaagcccaccgccaagaaggcacctgcgaaggtgaccaagacggcacaacgctga
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