Pandoraea sp. XJJ-1: OYT13_16515
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Entry
OYT13_16515 CDS
T10414
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00230
Purine metabolism
panx01100
Metabolic pathways
panx01120
Microbial metabolism in diverse environments
panx01232
Nucleotide metabolism
Module
panx_M00958
Adenine ribonucleotide degradation, AMP => Urate
panx_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
OYT13_16515 (xdhB)
Enzymes [BR:
panx01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
OYT13_16515 (xdhB)
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Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
DUF6055
Motif
Other DBs
NCBI-ProteinID:
WAL81443
UniProt:
A0A9E9D7L4
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Position
3607747..3610095
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AA seq
782 aa
AA seq
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MNTQVEGFMTQTGAAAGASAQVGRSRPHESAELHVAGEATYTDDIPELQGTLHCALGASP
KAHARVLSLDLDAVRRAPGVVAVYTAADIPGVNDCGPVIHDDPILADGLVQYIGQPMFAV
VAESHDAARRAARLAKGEYEDLPAILTPQAAKAAGASVLPPYQLRRGDADAALQAAPHRL
SGTFECNGQEQFYLEGQISYAIPKENDGIHVYCSTQHPTEMQALVSHALGWHSHQVQVEC
RRMGGGFGGKESQSGLFACVAALCATRLKRPVKLRLDRDDDFMMTGKRHGFYFEYDVGFD
DDGRITGAKVDMTLRAGFSADLSGPVATRAICHFDNAYFVPDADLRALCGKTNTQSNTAF
RGFGGPQGALIMEVVQDAIARRLGKDALDVRRVNFYGKTERNVTPYGQVVKDNIIHELVA
QLEQTSEYRARRDAVRAFNRTSPVLRKGLALTPLKFGISFNVQAFNQAGALVHIYRDGSM
LVNHGGTEMGQGLNTKVAQVVAHELGVDLSHVRVTATDTSKVANTSATAASTGADLNGKA
AQNAAWQIRQRLAAFAAQKYGGAPDDVQFANDVVSANGHDIPFPDLVEAAYWARVQLWSD
GFYATPGLSWDAATMNGNPFFYFAYGAAVSEVVLDTLTGEWRLLRADVLHDAGKSINPAL
DIGQVEGAFIQGMGWLTTEELWWNQEGKLMTHAPSTYKIPGISDCPTDFRVALFENTNVS
DSIHRSKAVGEPPLLLPFSVFNALRDAVASVNDYRDEPVLNAPATSEALLTAITELRTRS
AA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcaagtcgaaggcttcatgacgcagaccggtgccgcggcaggcgccagcgca
caggtgggccgctcgcggccccacgagtcggccgaactccacgtggccggcgaagccacc
tacaccgacgacatccccgaactgcaaggcacgctgcactgcgcgctcggggcgtcgccc
aaggcgcacgcacgcgtgctctcgctcgatctcgacgccgtgcgtcgggcgccgggcgtg
gtcgcggtctacactgccgccgacatccccggtgtgaacgattgcggtccggtcattcac
gacgacccgattctcgcggacggcctcgtccagtacatcgggcagccgatgttcgccgtg
gtggccgaatcgcatgacgcggcccgccgcgcggcgcgtctggccaagggcgaatacgaa
gacctgcccgccattctcacgccacaggccgccaaggccgcgggggccagcgtgctgccg
ccctatcaactgcgccgtggcgacgccgacgccgcgctgcaagccgcgccgcaccgtctg
agcggcacattcgagtgcaacgggcaggagcagttctatctcgaagggcaaatttcgtac
gcgatcccgaaggaaaacgacggcattcacgtctactgctcgacgcagcacccgaccgag
atgcaggcgctcgtctcgcacgcgctgggctggcacagccatcaggtgcaggtcgaatgc
cgtcgcatggggggcggcttcggcggcaaggaatcgcaatcggggctgtttgcctgtgtc
gccgcgttgtgcgccacgcgtctgaaacgcccggtcaagctgcgtctggatcgcgacgac
gatttcatgatgaccggcaagcgccacggcttttacttcgaatacgacgtcggcttcgac
gacgacggccgtatcacgggcgcgaaggtcgacatgacactgcgtgccggtttctcggcc
gacctgtcgggaccggtcgccacacgcgccatctgccacttcgacaacgcctatttcgtg
cccgacgccgacctgcgcgcgttgtgcggcaagacgaacacgcaatcgaacacggcgttt
cgcggtttcggcggcccgcagggcgcgctcatcatggaagtcgtacaggacgccattgca
cggcgcctgggcaaagacgcgctcgacgtgcgccgcgtgaacttctacggcaagaccgag
cgcaacgtcacgccgtacggacaggtcgtcaaggacaacatcattcacgaactcgtcgcg
caactggagcagacgagcgagtatcgcgcacgtcgcgacgccgtgcgcgcgttcaatcgc
acgagtcccgtgttgcgcaagggcctcgcgctcaccccactcaagttcggcatttcgttc
aacgtgcaggccttcaatcaggcgggcgcgctggtgcacatctatcgtgacggttcgatg
ctggtcaatcacggcggcaccgagatgggccagggcctgaacacgaaggttgcgcaggtc
gtggcgcacgaactgggcgtcgatctctcgcatgtgcgcgtgacggcgaccgacaccagc
aaggtggcgaacacgtcggccaccgcagcttcgacgggcgccgacctgaacggcaaggcc
gcgcagaacgccgcatggcagatccgccaacgtctggccgcgtttgccgcgcagaagtac
ggcggtgcgcccgacgacgtgcagttcgccaacgatgtggtgagtgcaaatggccacgac
atccccttccccgatctggtggaagcggcttattgggcccgcgtgcaattgtggtccgac
ggcttctatgccacgccgggcctgtcttgggacgccgcgaccatgaacggcaacccgttc
ttctacttcgcctacggcgcggccgtctccgaagtggtgctcgacacgctcaccggcgaa
tggcgtctgctacgcgccgacgtgcttcacgacgccggcaaatcgatcaaccccgcgctc
gacatcgggcaggtggaaggggcgttcattcaaggcatgggctggctgacgaccgaagaa
ctgtggtggaatcaggagggcaagctcatgacgcacgcgccgtccacgtacaagatcccc
ggcatcagcgattgcccaacggatttccgcgtggcgctgttcgagaacacgaacgtgtcg
gactccatccaccgctccaaggccgtgggcgagccgccgctgctgctgccgttctcggtg
ttcaacgcgttgcgcgacgccgtggcgagcgtgaacgactatcgggacgagccggtgctc
aatgcgccggcaacgtccgaggcgctgctcacggcgatcaccgagctgcgcacgcggagc
gccgcctga
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