Pandoraea sp. XJJ-1: OYT13_17375
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Entry
OYT13_17375 CDS
T10414
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00260
Glycine, serine and threonine metabolism
panx00460
Cyanoamino acid metabolism
panx00630
Glyoxylate and dicarboxylate metabolism
panx00670
One carbon pool by folate
panx00680
Methane metabolism
panx01100
Metabolic pathways
panx01110
Biosynthesis of secondary metabolites
panx01120
Microbial metabolism in diverse environments
panx01200
Carbon metabolism
panx01230
Biosynthesis of amino acids
panx01240
Biosynthesis of cofactors
panx04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OYT13_17375
09102 Energy metabolism
00680 Methane metabolism
OYT13_17375
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OYT13_17375
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OYT13_17375
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OYT13_17375
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OYT13_17375
Enzymes [BR:
panx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OYT13_17375
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Beta-prop_WDR5
Motif
Other DBs
NCBI-ProteinID:
WAL81606
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Position
complement(3771107..3772354)
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AA seq
415 aa
AA seq
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MFDKSKSTVASVDPDVWAAIQKENQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVYFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLAQQHKPKMIVAGASAFAL
RIDFERMSQIAKSVGAYFMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEFEKPINSAIFPGIQGGPLMHVIAGKAVAFKEAASPEFKAYQEQVVKNARVMAETL
VKRGLRIVSGKTESHVMLVDLRAKNITGKAAEAALGEAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFKEAEAELVGNLIADVLENPEDADNLARVRAQVAELTKRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaatcgaaatccaccgttgcctccgtcgatcccgacgtttgggctgcgatt
cagaaagaaaatcagcgtcaggaagaccacatcgagctgatcgcatcggaaaactacacc
agcccggccgtgatggaagcgcagggctcgcaactgaccaacaagtatgcggaaggttat
ccgggcaagcgctactacggtggttgcgagtatgtcgacatcgtggaacaactggccatt
gatcgcgtgaaggcgctgttcggtgccgaagccgcgaacgtgcagccgaactcgggctcg
caggctaaccagggcgtgtacttcgccatgctcaagccgggcgacaccatcatgggcatg
agcctggcgcacggtggccacctcacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagacatcgattacgacgctgccgag
aagctcgcgcagcagcacaagccgaagatgatcgtggcgggcgcctcggccttcgccttg
aggatcgacttcgagcgtatgtcgcagatcgccaagtcggtcggcgcgtacttcatggtc
gacatggcgcactatgccggtctgatcgccgccggtgtgtacccgaacccggtgccgcat
gccgacttcgtgacgacgaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatt
ctgatgaaggccgagttcgagaagccgatcaactcggccatcttcccgggcatccagggc
ggcccgctcatgcacgtgatcgccggcaaggccgtcgcgttcaaggaagccgcgtcgccg
gaattcaaggcgtaccaggaacaagtcgtgaagaacgcccgcgtgatggccgagacgctg
gtcaagcgcggcctgcgtatcgtgtcgggcaagaccgaatcgcacgtgatgctggttgac
ctgcgcgccaagaacatcaccggcaaggccgcggaagcggcgctgggcgaagcgcacatc
actgtgaacaagaacgcgattccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgcctgggctcgccggccatgacgacgcgcggtttcaaggaagctgaagccgaactcgtc
ggcaacctgatcgccgacgtgctggaaaacccggaagacgccgacaacctggctcgtgtg
cgcgcacaagtggctgagttgacgaagcgtttcccggtctacggctaa
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