Pandoraea sp. XJJ-1: OYT13_18155
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Entry
OYT13_18155 CDS
T10414
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OYT13_18155 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panx03019
]
OYT13_18155 (groL)
03110 Chaperones and folding catalysts [BR:
panx03110
]
OYT13_18155 (groL)
03029 Mitochondrial biogenesis [BR:
panx03029
]
OYT13_18155 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
panx04147
]
OYT13_18155 (groL)
Enzymes [BR:
panx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
OYT13_18155 (groL)
Messenger RNA biogenesis [BR:
panx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
OYT13_18155 (groL)
Chaperones and folding catalysts [BR:
panx03110
]
Heat shock proteins
HSP60 / Chaperonin
OYT13_18155 (groL)
Mitochondrial biogenesis [BR:
panx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
OYT13_18155 (groL)
Exosome [BR:
panx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OYT13_18155 (groL)
Exosomal proteins of other body fluids (saliva and urine)
OYT13_18155 (groL)
Exosomal proteins of breast cancer cells
OYT13_18155 (groL)
Exosomal proteins of colorectal cancer cells
OYT13_18155 (groL)
Exosomal proteins of bladder cancer cells
OYT13_18155 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
WAL81745
LinkDB
All DBs
Position
complement(3933667..3935313)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVAAAIEELRKISKPCTTNKEIAQVGSISANSDTSIGDYIAKAMDKVGKEGVITVEDG
KSLQDELDVVEGMQFDRGYLSPYFINTPEKQVAILENPFVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEIGLTLEKATLNELGQAKRIEIGKENTIIIDGAGEGVNIEARVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARVAVADIKGANPDQDAGIKIVLRAMEEPLRQIVANGGEEASVVVANVIAGKGNYGYNA
SSGEYGDLVEMGVVDPTKVTRTALQNAASVSGLLLTTDCAVAELPKEDAPMAGGMGDMGG
MGGMGMGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcgttttcggcgatgccgctcgtgccaagatggtcgagggcgtc
aacattctcgccaacgccgtcaaggtgaccctgggcccgaagggccgcaacgtcgtgctc
gagcgcagcttcggcggcccgaccgtgaccaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagctccagaacatgggcgcgcaaatggtcaaggaagtggcttccaag
accagcgacaacgccggtgacggtaccaccaccgccacggtgctggcccagtcgatcgtg
cgcgaaggcatgaagtacgttgcctcgggcatgaacccgatggacctgaagcgcggtatc
gacaaggccgttgccgccgccatcgaagaactgcgcaagatcagcaagccctgcacgacg
aacaaggaaatcgctcaagtcggctcgatctcggccaacagcgatacctcgatcggtgac
tatatcgccaaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctgcaagacgagctggacgtcgtcgaaggtatgcaattcgaccgcggctacctc
tcgccgtacttcatcaacaccccggaaaagcaagtcgcgatcctggaaaacccgttcgtc
ctgctgttcgacaagaaggtctcgaacatccgtgacctgctgccggtgctcgagcaagtc
gccaaggctggccgtccgctgctgatcatcgccgaagacgttgagggcgaagccctggca
acgctggtggtcaacaacatccgtggcatcctgaagacctgcgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgccgaagaaatcggcctgacgctggaaaaggccacgctcaacgaactgggccaagcc
aagcgcatcgaaatcggcaaggaaaacaccatcatcatcgatggtgccggcgaaggcgtg
aacatcgaagcccgcgtcaagcaaatccgtgcccagatcgaagaagccacgagcgactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggcgctgcgaccgaagtcgaaatgaaggaaaagaaggcacgcgtcgaagacgcgctg
cacgctacccgcgctgccgtggaagaaggcatcgtcccgggcggtggtgttgcgctgctg
cgtgctcgcgtggccgtggccgacatcaagggtgccaaccctgaccaggacgccggtatc
aagatcgttctgcgcgccatggaagaaccgctgcgccagatcgtcgccaacggcggcgaa
gaagccagcgtcgttgtggccaacgtgattgccggcaagggcaactacggctacaacgct
tcgagcggcgagtacggcgacctggtggaaatgggcgttgtggatccgacgaaggtcacc
cgcaccgcactgcaaaacgccgcttcggtgtcgggcctgctgctcacgaccgattgcgct
gttgccgaactgccgaaggaagatgctccgatggctggcggcatgggtgacatgggcggt
atgggcggcatgggcatgggcatgtaa
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