KEGG   Pandoraea sp. XJJ-1: OYT13_18710
Entry
OYT13_18710       CDS       T10414                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
panx  Pandoraea sp. XJJ-1
Pathway
panx03030  DNA replication
panx03430  Mismatch repair
panx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:panx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OYT13_18710
   03430 Mismatch repair
    OYT13_18710
   03440 Homologous recombination
    OYT13_18710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:panx03032]
    OYT13_18710
   03400 DNA repair and recombination proteins [BR:panx03400]
    OYT13_18710
Enzymes [BR:panx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OYT13_18710
DNA replication proteins [BR:panx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     OYT13_18710
DNA repair and recombination proteins [BR:panx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     OYT13_18710
SSDB
Motif
Pfam: RNase_T Peripla_BP_3 RNase_H_2
Other DBs
NCBI-ProteinID: WAL81837
LinkDB
Position
complement(4055104..4055715)
AA seq 203 aa
MQTVAILDFETTGLSPTQGDRATEIAVVLLRDGQIVDRYQSLMNAGRRIPSDVANLTGIT
NEMIASAPSVSKVMREAAKFVGKHPVVAHNAGFDRRFWQAELALIGEASDQSFACTMLAS
RRIYPHAQSHRLSNLAEMLRLPKTGRAHRAMVDAEMTTHLWCRLQYDIAQTYGVGRVDHD
LISRVQVTSKEKVPALLRSLAGG
NT seq 612 nt   +upstreamnt  +downstreamnt
atgcaaaccgttgccattctcgactttgaaactacaggcctttcccctacacaaggcgac
cgagcgacagaaattgcggtcgtgcttttgcgtgacgggcaaatcgtcgatcgctaccag
agcttaatgaatgcgggaagacgcatcccatccgatgtcgcaaatctgacgggtatcact
aacgaaatgattgcgtcggcaccttccgtgtcgaaggtcatgcgtgaagcggcgaagttc
gtcggtaagcacccagtcgtggctcataacgcaggcttcgacagacggttttggcaggcg
gagcttgcgctaatcggggaggcgtcagatcagtccttcgcctgcacgatgctcgcgtcg
aggcgtatttaccctcacgcgcaaagtcatcggctatcgaatttggcagagatgttgcga
ttgccgaaaaccggtcgtgcgcaccgagcaatggttgatgcggaaatgacgacgcatctc
tggtgccgactgcaatacgatattgcacaaacttacggcgtgggtcgagtcgatcacgac
ctgatctcacgtgtgcaggttaccagcaaggaaaaggttccggcgttgttgcgttcgctg
gctggcgggtag

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