Pandoraea sp. XJJ-1: OYT13_19115
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Entry
OYT13_19115 CDS
T10414
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx03440
Homologous recombination
Brite
Enzymes [BR:
panx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OYT13_19115 (recB)
DNA repair and recombination proteins [BR:
panx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OYT13_19115 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WAL81910
UniProt:
A0A9E9D8R3
LinkDB
All DBs
Position
complement(4146828..4150649)
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AA seq
1273 aa
AA seq
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MTQLIDLDVFSCDLDGVCLIEASAGTGKTWNICALYVRLLLEKRLTVEQILVVTFTNAAT
AELRERIRARLAALVAAMAPVFEEEDENDDIVDFDPDASDDPLFNVMIAGLIERGDMTPK
AIRDCLQTALRGFDQASIHTIHGFCQRALAEVPFAAGLPFAYELVPDDNGVRHDLAVEFW
RRVVEPLAAQDDGFAAWLVDAKRSPGTLTDQLARRLKKPMSELRWPSAVEADAQASSDPG
WFATYAAACECWDAEAAAITDLMRAALPSYRKNIYDAVSLAQAVSAWARYLGARDAGAPL
SSKAELLTTTRLAKDIKKGETPPDHRFFGMADALVQARADAHERYAMQWLRMLREWLMQA
PDQLALRKRELRVVSFDDLLGNIARALNQHPDLAEALRERYPCALIDEFQDTDPLQFDIF
SAVYGRRETAASNVGRGPMFMVGDPKQAIYSFRAADLHTYLAARENADAAYTLAVNQRST
PAIIEAGNRLFGANDRAFVLDGLEYPPVRPGARQRAPFTDAREVADFTVWWLPDDDEPLS
KDDAQQACARATAAEVARLLAGAARGDVRVGERPLAPGDIAVIVQTHRQGALMKSMLAEH
AVGSVELTQDSVFASDEAQTLLRVLRAVESPGDVRALRAALATELFGLDATALYRMQTSE
ASDAEAIAWIERLQRYRQLWIDRGFSAMWRTLMRELGLAARLVAQAGGERRLTNFMHLAE
LAQARWAEQPGMPALLRWLASQRNASGGEDAQLRLESDQNLVQIVTVHKSKGLEYGVVFC
PFLWDGAVRDGGRLDGLEYHDGSTAVIDFTDAAGKGSPAAAALRQEQSAEQARLLYVALT
RAVYRCYLAAGIYASRRSVKEACGGMLNWLAAGQGNTFDTWVSPTLDTDERVATIRSAWK
ALVGGPLAVVPLPMGDALDADMRVVHDAAPQLTPRASARALREVWRIGSFSGLLAGMHAG
PQLGGGQLSAPERTRPDYDAQANAGPTFALPPEGDDAWPPADDILRFPRGPAAGESLHRV
FELADFQARAQWPHAVARALRERPPGRGAEHNDTWRAMMMSMLADTLATPLRPGMQLADV
AMTERLTEMEFTYPADAVSLEALRGVLRQFGYPDLPLDATVLRGYLKGFIDLVFRHGGQW
WILDWKSNYLGTAPENYGADGLREAMAEHGYHLQYLLYTLALHRYLQRRLPDYRYDRDMG
GSLYLFVRGVRPDWARAHLAGDDVPGVFFDKPSREMVDALDRLFASGDNAALAQALSPDV
QGDDAGAADREGA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctcatcgacctcgacgtcttcagttgcgatctcgacggcgtttgcctgatc
gaagcgtcggctggcactggcaagacctggaacatctgcgcgctgtacgtgcggttgctg
ctcgagaagcgattgacggtcgagcagattcttgtcgtcaccttcaccaacgcggccacg
gccgagctgcgtgagcggattcgcgcgcggctggctgcgttggtggctgcgatggcgccg
gtcttcgaggaggaggacgagaacgacgatatcgtcgacttcgatccggacgccagcgac
gatccgttgttcaacgtcatgatcgcggggttgatcgagcgcggtgacatgacaccgaag
gccattcgcgattgcttgcaaacggcattgcgcggcttcgatcaggcctcgattcacacc
attcacgggttttgccaacgtgctctggcggaggtgccgtttgcggccggattgccgttc
gcctacgagctggtgccggacgacaatggcgtgcgtcacgatctggcggtcgaattctgg
cggcgtgtggtcgaaccgctggctgcgcaggacgacggcttcgccgcgtggctggtcgat
gctaaacgctcgcccggcacgctcaccgaccagttggcgcgtcggctgaagaaacccatg
tcggaattgcgctggccgtcggcggtcgaggcagacgcacaagcgtcgtcggacccggga
tggttcgcgacctacgcagcggcctgcgagtgctgggacgccgaggccgcggcaattacc
gatctgatgcgcgcggcgttgccgtcgtacaggaaaaacatttacgacgcggtatcgctt
gcgcaagccgtatcggcctgggcacgctatcttggcgcgcgcgatgccggggcgccgttg
agttcgaaggcggaattgctgaccaccacgcgcctcgccaaggacatcaaaaagggcgaa
acgccgcccgatcaccggtttttcggcatggccgatgcgctggtgcaagcgcgcgccgac
gcgcacgagcgttacgcgatgcagtggctgcggatgctgcgcgagtggctgatgcaagcc
ccggaccagttggcgcttcgcaagcgcgagttgcgggtggtgtcgttcgacgacctgctt
ggcaatattgcacgggcactgaaccagcaccccgatctggccgaggccctgcgcgagcga
tacccctgcgcactgatcgacgagttccaggacacggatccgctgcagttcgacattttc
agtgccgtgtacggtcggcgggagacggccgcatcgaacgtcgggcgggggccgatgttc
atggtgggtgacccgaagcaggcgatctacagcttccgggcggcggatctgcatacgtat
ctggccgcgcgcgagaacgccgacgcggcgtacacactggcggtgaatcaacgctcgaca
ccggccatcatcgaggcgggcaatcgcctgttcggggccaacgaccgggcgttcgtgctc
gacgggctcgagtacccgccggtgcgcccgggggcgcggcagcgagcgccgttcaccgac
gctcgcgaagtggccgacttcactgtctggtggcttccggacgatgacgagccgctgtcg
aaggacgacgcgcagcaggcgtgtgcgcgggcgacggcggccgaggtggcgcgcttgctc
gcgggcgcggcgcgcggtgacgtgcgcgtgggcgagcgaccgctcgcgccgggcgatatt
gccgtgatcgtgcagacgcaccggcagggcgcgctgatgaaatcgatgcttgccgagcac
gcggtgggcagcgtggagctgacgcaggactcggtgtttgccagtgacgaggcacaaacg
ctgttgcgggtgttgcgtgcagtggagtctcccggcgacgtgcgggcgctgcgcgctgcg
ctggcgaccgagctgttcgggctcgatgccacggcgttgtatcgcatgcagaccagcgaa
gcctccgatgccgaggcgatcgcgtggatcgagcgactacaacgctatcgtcagttatgg
atcgaccggggcttctcggcgatgtggcgcacgttgatgcgcgagttgggcctcgcggca
cgtctggtcgctcaggccggcggcgagcggcgtctgacgaacttcatgcacttggcagag
cttgcacaggcccgctgggccgagcagcccggcatgccggcgctgctgcgctggctggcc
tcgcagcgcaatgcgagcggcggtgaagacgcgcagttgcgtctcgagtcggatcagaat
ctggtgcagatcgtgaccgttcacaagtcgaaggggcttgagtatggcgtggtgttctgt
ccgtttctttgggacggcgcagtgcgcgacggtgggcgtctcgacggactcgagtatcac
gatgggtccacggccgtcatcgacttcaccgatgcggcgggcaaggggtcgcccgccgcc
gccgcgctgcggcaggagcaatcggcagagcaggcacgactgctgtacgtagcgctgacg
cgcgcggtctaccgttgctacctggcggccggcatttatgcgtcgcgacgcagcgtgaag
gaagcgtgcggcggcatgctcaactggctcgcggcagggcaagggaatacgttcgatacg
tgggtttcgccgacgctcgataccgacgagcgggtggccacgatccggtcggcatggaag
gcgctggtcggtggcccactggcggtggtgccgttgccaatgggcgatgcgttggatgcc
gacatgcgtgtcgtccacgacgcggcgccgcaactcaccccgcgcgcgagtgctcgcgcg
ttgcgcgaagtctggcggatcgggagcttctcggggctgttggcggggatgcacgccggt
ccgcaactgggcggcggtcaactcagtgcgccggagcgtacgcgtcccgattacgacgcg
caggccaatgccgggccgacgttcgccctgccgccggagggggacgatgcctggccgccc
gccgatgacattcttcgttttccgcgcggaccggcggccggcgagagtttgcaccgtgtg
ttcgaactggctgattttcaggcgcgtgcgcaatggccacatgcggtcgctagagccttg
cgcgaacgaccgcccgggcgcggagccgagcacaacgatacgtggcgcgccatgatgatg
agcatgctggccgatacgctcgctacaccgttgcgaccgggtatgcaactggctgacgtg
gcgatgaccgaacggctcaccgaaatggaattcacgtatccggccgatgccgtgtcgctc
gaggcgctgcgcggcgtgttgcgccagttcggttacccggacttgccgctcgacgccacg
gtgctgcgcggctacctcaaggggttcatcgatctggtgttccggcacggcggccagtgg
tggatcctcgactggaagtcgaactacctcggcactgccccggaaaactacggcgccgac
ggcctgcgcgaagcgatggccgagcacggctatcacctccaatacctcctctacacattg
gcgttgcatcgctacttgcaacgccgattacccgactaccgatacgaccgcgatatgggc
ggcagcctctacttgtttgtccggggcgttcggcccgactgggcgcgtgcgcatctggcc
ggtgacgatgtgccgggtgtcttcttcgacaagccgtcgcgtgagatggtcgacgcgctc
gatcggctcttcgcctcgggcgacaacgctgcgctggcgcaagcgttgtcgccggacgtt
caaggtgacgacgcgggcgctgccgaccgggagggcgcatga
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