Pandoraea sp. XJJ-1: OYT13_19120
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Entry
OYT13_19120 CDS
T10414
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OYT13_19120 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panx03400
]
OYT13_19120 (recC)
Enzymes [BR:
panx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OYT13_19120 (recC)
DNA repair and recombination proteins [BR:
panx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OYT13_19120 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WAL81911
UniProt:
A0A9E9I8H1
LinkDB
All DBs
Position
complement(4150646..4154062)
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AA seq
1138 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDLAQAPGSTGKAGNPFETETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGQLVTVPESSPFAPDRLVWPLYQCLAQPWGDASPRLAGYLTG
ADDVMRFELADRLAHLYDQYLTYRPNWLERWQSGETIAPGAATGWGETQRADEVWQSALW
RQVLAHLEIRERHPTLRAIDRIEALTPQTVPAGWPSRVSVFALSSMPPLSMALLKAMSRL
IEVHLYVLNPCESYWFDIVSPSRLSYLARRDGGAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRALFQPNPAPTLLAALQNGILTLDDGRHGAPDGVSVDGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLVTVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFAAILALAQQRVAVSSLVELARTEAIAQRYDLGGNALDTVQNWLHAAGARRGWRG
DALLRLDAPQACAPTGADVSPALERHTLGDAMMRLFLGYALPDDALPVDDWLPVGGIEGG
RAEWLGQLARLVDDLDATAVTLQTMRTGLAWRDQLLAMLEQFFSDEPRFADDVAEVRVAI
EQIGSAIADGAPEVRVPVDVVARVLANALDDPTRGGVPSGRVTFAAIPSLRLLPYRVVCM
IGMDDGVLPGRVRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLITYTGRSVR
DNAPLPPSTAVDELLDFAGQLLAPVSQGYCLDDQREARERLAVSHPLQPFSPAYFDGHDP
SLYSYDVANAEAAQQLADQLASPTPNARAAPFVREPLPAVVQTHLTLDDLLRFWRHPGRA
WARDRLGLSLGELLTEVDDEEPFMLDWAGRDALAARLLPRLMRHDARDARAHADAIERIA
KVSHELPGGATGAVWRRRALGGLRALASQVRDAQAEGTQELLVTLPLTPALPPSWRESTQ
AAWHGDATLRAACLLQGRLAPVSRYGLVMYRFGSQRPSDLLAAWLAHLALCAHLQQPEHA
GLDVAARTLWYGVDETFALRPVEDAATLLGQWVALYRLGQTRPLPFFTRSAWKLASTGKP
GEAQGAWLGSAFARGDADDPYTRLIWRGVDDPLAPPFDALANLLLGPLVQHLDVAEGA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgctccacctattcttttccaaccggttcaccacccttgaagccgccctgttgcgcgat
ctcgcacaggcgcccggcagcacggggaaagccggtaatccgttcgagacggaaaccatc
gtcgtgccaagtgtggccgtgcggcgccggctcgaactggactatgccgatgtgttcggc
gtgtgtgccaacgttcgtctgacctatctcgcccagtggctgtgggacatggcggggcaa
ctggtcacggtgcccgagagttcgccgtttgcgccggaccggcttgtctggccgctgtat
cagtgcctcgcccagccgtggggggacgcctcgccgcgactggcgggttatctgacgggc
gcggacgatgtcatgcgcttcgaattggccgaccgactggcgcatctctacgaccaatat
ctgacctatcggccgaactggcttgagcggtggcaatccggggagacgatcgcgccgggc
gccgccacgggctggggtgagacgcagcgtgccgacgaagtgtggcagagcgccttgtgg
cggcaggtgttggcgcatctggagattcgcgagcgtcacccaacgttgcgggccatcgac
cggatcgaggcgttgacgccgcagacggtgcctgccggatggccgtcacgcgtgtcggtg
ttcgcgctgtcgtcgatgccgccgctttcgatggcgttgctcaaggcgatgtctcgtctg
atcgaggtgcacctgtatgtcctgaatccgtgtgagagctattggtttgacatcgtgtcg
ccgtcacgactgtcgtatctggcgcggcgcgatgggggggcgcaccgggaagtggggcat
ccgttgctcgccgaatgggggcgccagacgcagtcgcatatcgatgctctgtatgccgac
ctcgcaccgcaggcggtggaggaccgggcgctgttccagcccaatcccgcaccgacgctg
ctcgccgccctgcaaaacggcattctcacgttggacgatggccgtcacggcgcgcccgat
ggcgtgagcgtcgacgggtcggtgcaggtgcatgtgtgccacagcctggcgcgtcagatc
gaagtgctgcatgaccggttgttggcgtgcttcgacgagattcccgatttgcgtcccgat
gatgtgctcgtgaccgtgccggatctggggcgcgcggccccgctgatcgacgccgtgttt
ggtaccgcgacacctcgcattccttatctggtgacggggttgccgccgacgcggaccaac
cccgtcgcgcgggcgttcgccgccatcctggccttggcgcagcagcgggtggcggtgtcg
agtctggtggaactggcacgcacggaggccatcgcacaacgctacgatctcggcggcaat
gcgctcgacaccgttcaaaactggttgcatgccgccggtgcacgacgcggctggcgcggt
gatgccctgctgcggctcgacgcgccgcaggcgtgcgcgccgaccggggccgatgtctcg
ccggcgttggagcggcacaccctgggcgatgcgatgatgcggctgtttctcggctacgcc
ttgcctgatgacgccttgccggtcgacgattggctaccggttgggggaatcgagggcggc
cgtgccgaatggctcgggcagctggcgcggctcgtcgacgatctcgatgccaccgccgtc
acgctgcaaacgatgcgcacggggctcgcgtggcgcgatcagctgctggcgatgctggaa
cagttcttttccgacgagcctcgttttgccgacgatgttgccgaggtgcgcgtggccatc
gaacagatcggctcggctatcgctgatggagcgcccgaagtgcgggtaccggttgacgtg
gtggcgcgcgtgctggccaatgccctcgacgatccgacgcgtggcggcgtgccatcgggg
cgtgtgacgtttgcggcgatccccagcctgcgcctgctgccgtaccgcgtggtgtgcatg
atcggcatggacgacggggtgctgccgggacgcgtgcgcgccgacgaattcgacctcatg
cgcgcgttgccgcaacgtggcgatcgccagcggcgcgacgacgagcgcaatcttttcctc
gatctgatgttgagtgcgcaggaccggttcctgatcacctacacgggccgaagcgtgcgc
gataatgcgccgctgccgccatcgacggctgtggacgaattgcttgacttcgccgggcag
ttgctcgcaccggtgtcccaggggtactgcctcgacgatcagcgcgaagcccgcgagcgg
cttgcggtgtcgcatccgcttcaaccgttttctcctgcgtatttcgatgggcacgacccg
tcgctctacagctacgacgtggccaatgccgaggcggcgcagcaattggcggatcaactg
gcgtcccccacaccgaatgcccgcgccgcgccattcgtgcgtgaaccgttgcccgctgtc
gtacaaacccatttgacgttggacgacctgctgcgtttctggcgtcatcccggcagagcg
tgggcgcgtgaccggctgggactctcgctcggcgaactgctcacggaggtcgacgacgaa
gagccgttcatgctcgactgggccggacgcgatgcgctggcggcgcgtctgctgccgcgc
ctgatgcgccacgacgcacgcgacgcccgcgcgcatgccgacgccattgagcgtattgcg
aaggtcagtcacgagttgccgggcggggcgaccggtgccgtctggcgccgcagagcgttg
ggcggcctgcgcgcgctggcgtcgcaggtgcgagacgcgcaggcggaaggcacgcaggag
ctgctggtgacgctgcctttgacgccggcgctgccgccgtcatggcgcgaatcgacgcag
gccgcctggcatggcgatgccacgttgcgcgcagcctgcctgttgcagggacgcttggcc
ccggtgtcgcgctatggactggtcatgtatcgattcggcagccagcgtccgagcgatctg
cttgccgcatggctggcccatctggcgctttgtgcgcatctccagcagcccgagcacgca
ggactggacgtagccgccagaacgctctggtacggcgtagacgagacattcgcgttgcgg
ccggtggaagacgcggcgacgctgttggggcaatgggtggcgctgtaccgcctcgggcag
acgcggccgttgccattctttacgcgaagcgcgtggaagttggcgagtaccggcaagccg
ggcgaggcgcaaggtgcgtggctcggttcggcattcgctcggggcgacgcggacgacccg
tacacgcgactgatctggcgcggcgtggacgatccgctggcgccgccgttcgatgcgctc
gccaatctactgctcggccctctggtgcaacaccttgacgtggcggagggcgcatga
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