Pandoraea sp. XJJ-1: OYT13_19385
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Entry
OYT13_19385 CDS
T10414
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
panx Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
panx03009
]
OYT13_19385
Enzymes [BR:
panx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
OYT13_19385
Ribosome biogenesis [BR:
panx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OYT13_19385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltr_RsmF_N
Methyltransf_25
MTS
Methyltransf_15
GCD14
NSUN5_fdxn-like
Cons_hypoth95
TRM5-TYW2_MTfase
Fibrillarin
Motif
Other DBs
NCBI-ProteinID:
WAL85345
LinkDB
All DBs
Position
complement(4214231..4215502)
Genome browser
AA seq
423 aa
AA seq
DB search
MRGEHLSPALFEHTQRLLGSVLTFSGPADTLVSTYFRANAKLGHRERGVLAETVFAILRR
KLEFGQHAGSGSGPLERRLALLGLAFTRGLASVQLVATPDEVSWLEHVGQIDPASLSARV
RTNLPEWLYERLATRFDGTELEALAAALNQPAPLDCRVNVVKANRDDVLAQLRADGFSAE
PTPFAPNGIRLAGKPALQKHPLFISGAIEVQDEGSQLLCQLVAPRRGEMIVDFCAGAGGK
TLAIGAQMRSTGRLYAFDISEKRLAKLKPRLARSGLSNVYPVMIDSENDSKIKRLAGKID
RVLVDAPCSGLGTLRRNPDLKWRQSPQSVAELTQKQASILASAARLVKPGGRLVYATCSL
LNEENSAIAEAFAAAHPDFALLPANALLAAQKIDIDTGEYLELLPNRHATDGFFAAVFER
RSA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgagcacctgtcgcccgcactcttcgagcacacgcaacgcctgctcggcagc
gtgctgacgttcagcggtccggccgatacgcttgtgagcacgtacttccgcgccaacgcc
aagctgggccaccgcgagcgcggtgtgctggcggaaacggtcttcgccattctgcgccgc
aagctcgaattcggtcagcatgcaggcagtggctccgggccgctggagcgacgcctggca
ttgctcggtctggcgttcacgcgcggtctggcgtcggtgcaactggtggcaacgcccgat
gaagtctcgtggctcgagcacgtcggtcagatcgacccggccagcctgtctgctcgcgtg
cgcaccaatttgccggaatggctctatgagcgtctggccacgcgattcgacggcactgaa
ctcgaagcgctcgctgcggcccttaaccagcccgcgccgctcgactgccgtgtgaacgtg
gtcaaggcgaaccgggacgatgtgctcgcgcaactgcgtgcggacggcttttcggccgag
ccgacgccgttcgcgcccaacggcattcgtctggccggcaagcctgcactgcaaaagcat
ccgctgttcatttccggtgcgatcgaagttcaggacgagggaagccagttgctgtgccaa
ttggtcgcgccgcgtcgcggggagatgatcgtcgacttctgcgccggggccggcggcaag
acgctcgccatcggcgcgcagatgcgttcgacggggcgcctttacgcgttcgatatctcg
gaaaagcgcctggcgaagctcaagccgcgtctggcgcgcagcggcctgtcgaacgtctat
ccggtcatgatcgacagcgagaacgacagcaagatcaagcgtctggcgggcaagatcgac
cgcgtgctggtcgacgccccttgcagtgggcttggcacgctgcgtcgcaatccggatctg
aaatggcgtcagtcgccacagtcggtcgcggagctcacgcaaaagcaggcgtcgatcctc
gcgagcgcagcacgtctggtgaagccgggcggccgtctcgtgtacgctacgtgcagcctg
ctgaacgaagagaacagtgccatcgccgaggcgtttgcggccgcacatccggatttcgcg
ctgttaccggcgaatgcgttgcttgcagcgcagaaaatcgacatcgacacgggcgagtat
ctcgaattgctgccgaaccgccacgcgaccgacggctttttcgccgccgtgttcgagcga
cgttcggcgtaa
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