KEGG   Pandoraea sp. XJJ-1: OYT13_20335
Entry
OYT13_20335       CDS       T10414                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
panx  Pandoraea sp. XJJ-1
Brite
KEGG Orthology (KO) [BR:panx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:panx02044]
    OYT13_20335 (traD)
Secretion system [BR:panx02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   OYT13_20335 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: WAL82125
LinkDB
Position
4410493..4412679
AA seq 728 aa
MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPSMGVGSALAFGAYGAIRYR
DARVILRYRRNIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYV
EPTPAYRLARRLEERLEFAPFPLSGLSALTGWDVPFNPVQPLPPVGGLPRLHGIEPDEVD
VSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRVNAAGEHEVVIVIDPKGDADLLKR
MYVEAKRAGREGEFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREF
AWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAK
LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE
KLTSGKIAQLLAPNYSDLADPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSD
LVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAY
TQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGAT
DSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPD
PDEVMPADLQQLAGYMRQSYSEATQWWEFTSAPALQDAALPDDLLDDAALAEPAAFGAGD
TDSDEAAP
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgtcggggaaacagccggtcgaggtactgcttcgcccagcggtggagctatacaccgtt
gccgcatgcgcgggcgccgcgtttctgtccctggtggccccatggtcgctcgcgctgagc
ccgtccatgggcgtcggcagcgcgctggcgttcggcgcctacggcgcgatccgctaccgc
gatgcccgcgtcatcctgcgctaccggcgcaacatccgccgcctgccgcgctacgtgatg
accagcaaggacgtgccggtcagccagcagcggctgttcgtggggcgcggtttcctgtgg
gagcagaagcacacccataggctgatgcagacgtaccggccggagttccgccgctacgtc
gagccgacgccggcctaccggctggctcgacggctggaagaacgattggagttcgcgccg
ttcccgctgtctgggctgtccgcgcttaccggctgggacgtgcctttcaacccggtgcag
ccgcttccgcccgtgggcggcttgccccgtctgcacggcatcgagcccgacgaggtggac
gtcagcttgccgctcggcgagcgcgtcggtcactcgctggtgctgggcaccacgcgcgtc
ggcaagacccggctggccgaactgttcgtgacccaggacatccggcgcgtgaacgccgcg
ggcgagcacgaggtggtgatcgtcattgaccccaagggcgatgccgatctcctgaagagg
atgtacgtcgaggccaagcgcgcgggccgcgaaggcgagttctacgtctttcatttgggc
tggccggacatttccgcgcgctacaacgccgtggggcgcttcggccgcatcagcgaggtg
gccacccgcgtcgcggggcagctttccggcgaaggcaacagcgcggcgttccgcgagttc
gcctggcgcttcgtcaacatcatcgcgcgcgccctggtggaactgggacagcgaccggac
tacatgctgatccagcggcacgtcatcaacatcgacgcgctgttcatcgagtacgcccag
cattacttcgccaagaccgagcccaaggcctgggaggtgatcgtccagatcgaggccaag
ctcaacgagaagaacattccgcgcaacatgatcgggcgcgagaagcgcgtggtggcgctg
gagcagtacctctcgcaggcacgcaactatgacccggtgctggatggtctgcgctctgct
gtccgatacgacaagacctatttcgacaagatcgtcgccagcctcttgccgctgctggag
aagctcaccagcggcaagatcgcgcagctcctggccccgaactactccgacctggccgac
ccgcgcccgatcttcgattggatgcagatcatccgtaagagggccatcgtctatgtgggc
ctggatgcactctccgacgccgaggtcgccgcagcggtcggcaactcgatgttcagcgat
ctcgtgtcggtcgccgggcatatctacaagcacgggatcgacgacggcctgccgggcgca
tcggccggtgcgcgcgtgcccatcaatgtccacgccgacgaattcaacgagttgatgggc
gacgagttcattccattgatcaacaaggggggtggcgcaggcctccaggtcaccgcgtac
acgcagaccctctcggacatcgaggcccgcatcggcaaccgcgccaaggccggtcaggtg
atcggcaacttcaacaacctgttcatgctgcgtgtgcgcgaaaccgcgaccgctgaactg
ctgactcggcaactgccgaaggtcgaggtctataccaccaccatcgtcagcggcgcgacc
gacagctccgacattcgcggggcgacggatttcacgtcgaacacccaggaccgcatcagc
atgtccagcgtgccgatgatcgagccgtcgcacgtcgtcggcctgcccaagggccagtgc
ttcgcgctgctgcagggcggccagctttggaaagtgcgcatgccgctgccggccccggac
ccggacgaggtgatgccggcagacttgcagcaactggccgggtacatgcgccagagctac
agcgaagcgacgcagtggtgggagttcaccagcgccccggcattgcaggacgcagccttg
cctgatgatctgctggatgacgccgcgctagccgaaccggccgcctttggcgcaggcgat
acggatagcgacgaggcagcgccatga

DBGET integrated database retrieval system