Pandoraea sp. XJJ-1: OYT13_21435
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Entry
OYT13_21435 CDS
T10414
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00020
Citrate cycle (TCA cycle)
panx00640
Propanoate metabolism
panx00660
C5-Branched dibasic acid metabolism
panx00720
Other carbon fixation pathways
panx01100
Metabolic pathways
panx01110
Biosynthesis of secondary metabolites
panx01120
Microbial metabolism in diverse environments
panx01200
Carbon metabolism
Module
panx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
panx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OYT13_21435 (sucD)
00640 Propanoate metabolism
OYT13_21435 (sucD)
00660 C5-Branched dibasic acid metabolism
OYT13_21435 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
OYT13_21435 (sucD)
Enzymes [BR:
panx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OYT13_21435 (sucD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
WAL82318
LinkDB
All DBs
Position
complement(4643847..4644728)
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AA seq
293 aa
AA seq
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MSILINKDTKVITQGITGKTGQFHTRMCREYANGKNAFVAGVNPKKAGEDFEGIPIFGSV
KDAKAQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMIEVKDRMRREGR
KTLLLGPNCPGVITPDELKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLGQSTA
VGIGGDPINGLKHIDVMQMFNDDPDTDAVIMIGEIGGPDEAMAAEWIKGNMKKPVVGFIA
GVTAPPGKRMGHAGALISGGADTAEAKLEIMDACGIKVTKNPSEMGRLLKSVL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctgatcaacaaagatacaaaggtcatcacccaaggtatcactggcaagacc
ggccagttccatacccgcatgtgccgcgaatacgcgaatggcaagaacgcgttcgtcgcc
ggcgtgaacccgaagaaggctggcgaagacttcgagggcattcccattttcggttcggtc
aaggacgcgaaggcacagaccggcgcgaccgtgtcggtgatctacgtgccgcccgcaggc
gcggccgccgcgatctgggaagccgtcgaagccgatctggacctggcgatctgtatcacg
gaagggatcccggttcgtgacatgatcgaagtgaaggaccgtatgcgtcgcgaaggtcgc
aagaccctgctgctcggcccgaactgcccgggcgtgatcacgccggacgaactgaagatc
ggcatcatgccgggtcacatccacaagaagggtcgcattggcgtggtgtcgcgctcgggc
accctgacgtatgaagccgtgggtcaactgaccgccctgggcctgggccaatcgaccgcc
gtcggtatcggtggcgatccgatcaatggtctgaagcacatcgacgtcatgcaaatgttc
aacgacgatccggatacggacgccgtgatcatgatcggtgaaatcggtggcccggacgaa
gccatggcggccgagtggatcaagggcaacatgaagaagccggtcgtcggcttcatcgcg
ggcgtgacggcgcccccgggcaagcgcatgggccacgccggcgcgctgatctcgggcggt
gccgatacggctgaagccaagctggaaatcatggacgcctgcggtatcaaggtgaccaag
aacccgtcggaaatgggccgtctgctcaagtcggtgctgtaa
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