Pandoraea sp. XJJ-1: OYT13_21440
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Entry
OYT13_21440 CDS
T10414
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00020
Citrate cycle (TCA cycle)
panx00640
Propanoate metabolism
panx00660
C5-Branched dibasic acid metabolism
panx00720
Other carbon fixation pathways
panx01100
Metabolic pathways
panx01110
Biosynthesis of secondary metabolites
panx01120
Microbial metabolism in diverse environments
panx01200
Carbon metabolism
Module
panx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
panx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
OYT13_21440 (sucC)
00640 Propanoate metabolism
OYT13_21440 (sucC)
00660 C5-Branched dibasic acid metabolism
OYT13_21440 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
OYT13_21440 (sucC)
Enzymes [BR:
panx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
OYT13_21440 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
CPSase_L_D2
GARS_A
Citrate_bind
Motif
Other DBs
NCBI-ProteinID:
WAL82319
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Position
complement(4644811..4645977)
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AA seq
388 aa
AA seq
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MKIHEYQGKEILRKFGVAVPRGIPAFSVDEAVKAAEELGGPVWVVKAQIHAGGRGKGGGV
KVAKSIEQVREYAGQILGMQLITHQTGPEGQKVNRLLIEDGADIKNELYVSLVVDRITQK
IVLMGSSEGGMDIEEVAETHPELIHKVIVEPSVGLTDAQADDLAKKIGVPDASIAQARAI
LQGLYKAFWETDASLAEINPLNVSSNGTVTALDAKFNFDSNALFRHPEIVAYRDLDEEDP
AEVEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVTE
AFKIMLKNPNLTAILVNIFGGIMRCDVIAEGVIAASKAVSLKVPLVVRMKGTNEDLGKKM
LAESGLPIISADSMEEAAQKVVAAAAGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcatgagtatcaaggcaaggaaatcctccgaaaattcggagtcgcggtgccc
cgcggcattccggcgttttccgtggacgaggccgtgaaggcagccgaagaactcggcggt
ccggtttgggtggtcaaggcccagattcacgcaggcggtcgcggtaagggcggcggcgtg
aaggttgccaagtcgatcgagcaagtgcgcgaatacgccggccagatcctcggcatgcaa
ctgatcacgcaccagaccggtccggaaggtcaaaaggtcaaccgcctgctgatcgaagac
ggcgccgacatcaagaacgaactctatgtcagcctcgtggtcgaccgcatcacgcagaag
attgtgctgatgggttcgagcgaaggcggcatggacatcgaagaagtcgccgaaacgcat
ccggaactgatccacaaggtcatcgttgagccgtccgtcggtctgaccgacgcgcaagcc
gacgatctggccaagaagatcggcgttcccgacgcttcgatcgctcaagcccgcgcgatt
ctgcaaggtctgtacaaggcgttctgggaaaccgatgcgtcgctggccgaaatcaacccg
ctgaacgtgagcagcaacggcacggtcaccgcgctggacgccaagttcaacttcgactcg
aacgccctgttccgtcacccggaaatcgtcgcttaccgcgacctggacgaagaagatccg
gcagaagtcgaagcctcgaagttcgatctggcctacatctcgctcgacggtaacatcggc
tgcctggtgaacggtgccggtctggccatggccacgatggacaccatcaagctcttcggc
ggcgagccggcgaacttcctggacgtgggcggtggcgccacgaccgagaaggtcaccgaa
gcgttcaagatcatgctgaagaacccgaacctgaccgccattctggtcaacatcttcggt
ggcatcatgcgttgcgacgtgatcgccgaaggcgtgatcgcagcctcgaaggccgtctcg
ctgaaggtgccgctggtcgtgcgcatgaagggcacgaacgaagacctgggcaagaagatg
ctcgccgaatcgggtctgccgatcatctcggcggacagcatggaagaagctgcccagaag
gttgtcgcggctgccgcaggcaagtaa
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