Pandoraea sp. XJJ-1: OYT13_21910
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Entry
OYT13_21910 CDS
T10414
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
panx Pandoraea sp. XJJ-1
Brite
Enzymes [BR:
panx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OYT13_21910
Transfer RNA biogenesis [BR:
panx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OYT13_21910
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GFIT
Other DBs
NCBI-ProteinID:
WAL82403
UniProt:
A0A9E9D9F2
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Position
complement(4747792..4750020)
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AA seq
742 aa
AA seq
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MNIFFEESGGFKAGTVLSQQGESYQVELPGGRRSKIKGRDVLLRFESPSPAELMTQAHAA
AQDIDMSFLWECAPAEEFAFPVLAAEYFGEGAGVAQQAGLALALQASPVYFRRKGRGQYQ
RAPEEQLQAALAGLARKQQQAELQAVYADQLIAGTLPDALKGKELLLLFRPDKNTIEWKA
LDAAAMALGKTHAEVMLACGGISSPRAYHEAAFLYEHFPRGTGFPELGPIPVPGDDLPLA
DVQAFSIDDSTTTEIDDALSVQVLPDGLLRVGIHIAAPALGITRGDAIDEIARARLSTVY
APGEKITMLPDAIVEAYTLAEGGARPALSLYVVVKADTYEIVATETHAERVPISANLRHN
ELDAIITAETLADGSGEYPHKEALRLLWPFAQSLYEKRQAARVGYGLRPEVQNKTDFNFY
VEGEQVTIKQRMRGAPLDLIVAEMAILANSRWGRLLAECGVPGIYRAQRAYGVNRTRMQT
SPAPHEGLGVEQYAWSTSPLRRYVDLVNQWQLLACVRHGVTAKLAAPFKPKDADLYVTVS
SFEAAYAAYAEHQSRMERYWCLRWLIQENKSQVQASVLKGDTVRLNDIPLTLIVLGLGPH
ARGTQIMLDVLSLDVVTLSISVRVAQVLGASQNGLGEDDDEGAGGAGDGGGGHDGGDGAE
GGDDAGGADDADDADGANDAEGANDTESDGRDESQGDDDVASASADVTAAASQTVDVASG
TSSLAAALMVAGGRDASPGSAC
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttttgaggaatccggcggcttcaaggctggcacggtgttgtcgcagcaa
ggtgagtcgtaccaggtggagctgcccggtggacgccgcagcaagatcaaggggcgcgac
gtgctgctgcgtttcgagtcgccgtcgcccgcggagctgatgacgcaggcgcacgccgcc
gcacaggacatcgatatgagtttcctgtgggaatgcgcgcctgccgaggagttcgcgttc
ccggtgctcgctgccgagtatttcggcgaaggcgccggcgttgcgcaacaggccgggctc
gcgctggcgctgcaggcttcgccggtgtacttccgccgaaaaggccgcggtcagtaccaa
cgcgcgccggaggaacaactgcaggccgcgctcgcgggactcgcccgcaagcaacagcag
gcggaattgcaggccgtgtatgccgatcaactgatcgccggcacgctgcccgacgcgctc
aagggcaaggaactgctgctgctgttccgtcccgacaagaacaccatcgagtggaaggcg
ctcgacgccgccgccatggcgctgggcaagacgcacgccgaggtgatgctcgcctgcggc
ggcatttcgtcgccgcgcgcgtatcacgaggcggcgttcctctacgaacacttcccgcgc
ggcaccggcttcccggaactcgggccgatcccggtacccggcgacgacttgccgctggcc
gacgtgcaggcgttctccatcgacgattcgacgacgaccgagatcgacgacgccctctcg
gtgcaggtactgcccgatgggctgttgcgtgtgggcatccacattgcggcgccggcactc
ggcattacgcggggtgacgccattgatgagatcgcgcgcgcgcgtctgtcgacggtctat
gcgccgggcgaaaagatcacgatgctccccgatgcgatagtcgaggcgtacacgcttgcc
gagggcggcgcgcgtccggcactgtcgctgtatgtcgtggtcaaggctgacacgtacgag
atcgtggcgacggaaacgcatgccgagcgggtgccgatctcggcaaacctgcgtcacaac
gaactcgacgcgatcatcacggccgagacgctggccgatggcagcggcgagtatccgcac
aaggaagcgctgcggctgttgtggccgttcgcgcagtcgctctacgagaaacgtcaggcc
gcgcgcgtgggttatggcctgcgtccggaagtgcagaacaagaccgacttcaatttctac
gtcgaaggcgagcaggtcacgatcaagcagcgtatgcgcggtgcgccgctggacctgatc
gtcgccgagatggcgattctcgcgaacagccggtggggacgcctgctggccgagtgcggc
gtgcccggcatctatcgcgcgcagcgtgcttacggcgtgaatcgcacgcgcatgcagaca
tcgccggcgccgcacgaaggtctgggtgtcgagcagtacgcatggagcacctcgccgctg
cgtcgctatgtggatctggtcaaccagtggcagttgcttgcgtgcgtgcgtcacggcgtg
acggccaagctggcggcacccttcaagcccaaggatgccgacctgtacgtgaccgtgtcg
agcttcgaagccgcctatgcggcttatgccgagcaccagagccggatggagcgctactgg
tgcctgcgctggttgattcaggagaacaagtcgcaggtccaggcgagcgtgctcaagggc
gacaccgtgcgcctgaacgatattccgctgacgctgatcgttctggggcttggcccgcac
gcgcgcggtacgcagatcatgctcgacgtgctgtcgctcgacgtcgtcacgctcagcatc
tcggtacgtgtcgcgcaggtgctgggcgccagccagaacggactgggcgaagacgatgac
gaaggcgccggcggtgcaggagacggcggtgggggtcacgatggaggcgatggggccgaa
ggtggcgacgacgcgggaggggccgacgatgccgacgatgccgatggcgccaacgatgcg
gagggggcgaacgataccgaaagcgacggccgcgacgaaagccagggtgacgacgacgtc
gcctcggcctcggccgacgtcaccgccgcggcgtcgcaaaccgttgatgttgcgtccggc
acttcttcgcttgctgccgcgctgatggtggcgggggggcgcgacgcgtctcccggttcg
gcgtgctga
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