Pandoraea sp. XJJ-1: OYT13_22020
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Entry
OYT13_22020 CDS
T10414
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx02024
Quorum sensing
panx03060
Protein export
panx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OYT13_22020 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OYT13_22020 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OYT13_22020 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
panx02044
]
OYT13_22020 (ffh)
Enzymes [BR:
panx01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OYT13_22020 (ffh)
Secretion system [BR:
panx02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OYT13_22020 (ffh)
Eukaryotic Sec-SRP protein
OYT13_22020 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_30
AAA_31
AAA_16
YqeC
AAA_33
T2SSE
APS_kinase
ABC_tran
ATP_bind_1
AAA_14
ArsA_ATPase
cobW
AAA_18
KTI12
Thymidylate_kin
nSTAND3
MobB
Rad17
TsaE
Diphthamide_syn
DO-GTPase1
NTPase_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WAL82423
UniProt:
A0A9E9IBA7
LinkDB
All DBs
Position
4770768..4772132
Genome browser
AA seq
454 aa
AA seq
DB search
MLDNLTTRLAKVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVRDFVAKVKEKAL
GEEVISSLSPGQALVGVVQRELTALMGGDYEGRAAELNLATTPPAIILMAGLQGAGKTTT
VGKLAKLLRAQKKKVLTVSTDVYRPAAIAQLETVTKQVDADFFPSQPDQKPVDIARAAVD
WARRHHHDVLLVDTAGRLGIDEAMMQEISALHAELKPIETLFVVDAMLGQDAVNTARAFN
DALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFVGVGEKLDGLEVFYPDRMANRILGM
GDILALVEEAQRGVDVQAAQKLAEKVKKGGDFDLNDFKAQIGQMKNMGGLSSLMDKLPAQ
FQAAASQTNMDQAEKQVRRMEGIINAMTPSERAKPELIKASRKRRIAAGAGVQVQEVNRM
LNQYDQMRTMMKKLKGGGMMKMMRSMKGMMPGMR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaatctcactacgcgcctcgccaaggtcgtcaagacgctgcgcggcgaagcc
cgcctgaccgaggccaacacgcaggaaatgctgcgtgaagtgcgtctcgcgctgctcgag
gccgacgtcgccctgcccgtggtgcgcgatttcgtcgccaaggtcaaggaaaaggcgctc
ggcgaggaagtcatttccagcctctcgccgggccaggcgcttgtcggcgtggtgcaacgc
gaactgaccgcgctcatgggcggcgattatgaaggccgcgccgccgaactcaatctcgcg
accacgccgcccgccatcatcctgatggccggtctgcagggcgccggcaagaccaccacc
gtcggcaagctcgccaagctgctgcgcgcgcagaaaaagaaggtcctcacggtttccacc
gacgtctatcgtcccgccgcgattgcccagttggagacggtgacgaagcaggtcgacgcc
gacttcttcccgtcgcaacccgatcagaagccggtggacattgcccgtgcggccgtcgac
tgggcgcgacgccatcaccatgacgtgctgctcgtcgacacggccggccgtctgggcatc
gacgaagcgatgatgcaggaaatcagcgccctgcatgccgagctcaaaccgatcgaaacg
ctgttcgtcgtcgacgccatgctcggccaggatgccgtcaacacggcccgcgccttcaac
gacgcgctgccgctcaccggcgtggtgctcaccaagctcgacggcgactcgcgcggcggt
gcggcgctgtcggtgcgtcacatcaccggcaagccgatcaaattcgtcggtgtgggcgaa
aaactcgacggccttgaggtcttctacccggatcgtatggcgaaccggattctcggcatg
ggcgacattctcgcgctcgtcgaggaagcgcaacggggcgtcgacgttcaggccgcgcaa
aagctcgccgagaaggtcaagaagggcggtgacttcgacctgaacgacttcaaggcgcaa
atcggccagatgaagaacatgggcggcctgtcgtcgctcatggacaagctccccgcgcaa
ttccaggccgccgccagccagaccaatatggatcaggccgagaagcaggtgcgccgcatg
gagggcattatcaacgcgatgacgccgtccgagcgcgccaagccggaattgatcaaggcg
agccgcaagcgccgcatcgccgccggtgcgggcgttcaggtgcaggaggtcaatcgcatg
ctcaatcagtacgaccagatgcgcaccatgatgaagaagctcaagggcggcggcatgatg
aagatgatgcgcagcatgaaaggcatgatgcccggtatgcgctga
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