Pandoraea sp. XJJ-1: OYT13_23725
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Entry
OYT13_23725 CDS
T10414
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00051
Fructose and mannose metabolism
panx00541
Biosynthesis of various nucleotide sugars
panx01100
Metabolic pathways
panx01250
Biosynthesis of nucleotide sugars
Module
panx_M01017
GDP-L-Col biosynthesis, GDP-Man => GDP-L-Col
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
OYT13_23725 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OYT13_23725 (gmd)
Enzymes [BR:
panx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
OYT13_23725 (gmd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
DUF6715
Motif
Other DBs
NCBI-ProteinID:
WAL82717
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Position
5126145..5127272
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AA seq
375 aa
AA seq
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MAESERKVALITGVTGQDGAYLAEFLLGKGYEVHGIKRRTSLFNTDRIDHLFQDPHVPNP
RFILHHGDLTDSSSLVRIIQQTKPDEIYNLAAQSHVAVSFEEPEYTANSDGLGALRILEA
MRILGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYREAYG
MYACNGILFNHESPIRGETFVTRKITRALARIKLGLQENLFLGNLNALRDWGHARDYVEM
QWLMLQQDTPDDFVIATGEQHSVRDFVNRAGDALGLQFEWRGEGVDEVGILTAAEGDGAQ
KLIGKAVVAVDPRYFRPTEVETLLGDASKAHDKLGWKPQTSFAELVREMAESDLREAAFE
LQVKASGHKALRYQG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagcgaacgcaaagttgccctgattacgggcgttacggggcaggatggcgcg
tacctagccgagttcttgcttggcaagggctatgaagtccacggcatcaagcgccgtact
tcgctgttcaacacggatcggattgaccatctgttccaagacccgcacgtcccgaatccg
cgcttcatactgcatcatggcgacctgaccgactcatcgagtctcgtgcgcatcattcag
caaacgaagccggacgagatctataacctcgccgcacagagtcacgtggcagtgtcgttc
gaagaacccgaatacacggccaattccgacggattgggcgcattgcgaattctcgaagct
atgcggattctcggcctggaaaagaagacccgtttttaccaggcatcgacatccgaactg
tacggtttggtgcaagagattccgcagaaggaaaccacgccgttctacccgcgtagcccc
tatgccgtagccaaactttacgcgtactggatcacggtgaactatcgcgaagcttacggc
atgtacgcctgcaacggcattctgttcaatcacgaaagtccgattcgtggcgaaacgttt
gtcacgcgcaaaatcacccgtgccctcgcgcgcatcaagctcggcctgcaggaaaatctg
ttccttggcaacctgaatgccttgcgtgactggggccacgctcgcgattacgtcgagatg
cagtggttgatgttgcagcaggacactccggacgacttcgtgatcgcgaccggcgagcag
catagtgtgcgcgatttcgtcaatcgcgccggcgatgcgcttggtctccagtttgagtgg
cgcggcgagggggtcgatgaggtgggcattctgaccgctgccgaaggcgatggtgcgcag
aagctgatcggcaaggccgtcgttgccgtggatccgcgctatttccgcccgaccgaagtc
gagacgctcctgggcgacgcgagcaaggcacacgacaagttgggctggaagccacagacg
agctttgccgagctggtacgcgaaatggccgagtccgatctccgcgaagcggcgttcgag
ttgcaggtcaaggcctcggggcacaaggccctgcgctatcaaggctga
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