Pandoraea sp. XJJ-1: OYT13_23735
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Entry
OYT13_23735 CDS
T10414
Name
(GenBank) DegT/DnrJ/EryC1/StrS family aminotransferase
KO
K21131
GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase [EC:
4.2.1.168
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00541
Biosynthesis of various nucleotide sugars
panx01100
Metabolic pathways
panx01250
Biosynthesis of nucleotide sugars
Module
panx_M01017
GDP-L-Col biosynthesis, GDP-Man => GDP-L-Col
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OYT13_23735
Enzymes [BR:
panx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.168 GDP-4-dehydro-6-deoxy-alpha-D-mannose 3-dehydratase
OYT13_23735
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WAL85408
UniProt:
A0A9E9IEA1
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Position
5128198..5129364
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AA seq
388 aa
AA seq
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MSFQYPLATSSWGAEEYDAIQRVVASGMFSMGPKVAEFERCFADYVGSKYCVMVNSGSSA
NLLMVAAQFYTKNPAFKLERGDEVIVPAVSWSTTYYPLYQYGLKLRFVDIDLETLNYDLD
ALEAAITEKTRAIMVVNLLGNPNNFARLKQIIGEREIVMIEDNCESMGATFENRQAGTFG
IMGSYSAFFSHHISTMEGGMIVTDDEELYHILLSLRAHGWTRNLPKFNHVCGEKSDDPFK
ESFRFMLPGYNVRPLEMSGAIGIEQVKRLPELIRARRANGALLQEAMANHPELMIQREIG
ESSWFGFSLVIRRGSSLTRDTLVKRLNEAGFECRPIVAGNFAKNDVVKYFDHSIAGELRN
AEHIDHSGLFVGNHHYPIESAITALRQI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaatatccactcgctacgtcttcctggggggccgaggagtatgacgccatt
cagcgcgttgtcgcgtctggcatgttttccatggggccgaaagtagcggaattcgagcgt
tgctttgctgactatgtcggcagcaagtattgcgtgatggtgaattccggatcctcggcc
aatctattgatggtggcggcacagttctacacgaagaatccggcgttcaagctggagcga
ggcgatgaagtgatcgtgcccgctgtgtcgtggagcaccacatactatcctctgtatcaa
tacggactgaagctgcgttttgtcgatatcgatctcgagacgctcaactacgatctggac
gcactcgaagcggcgatcaccgaaaaaactcgcgcgatcatggtcgtgaacctgctgggc
aaccccaataacttcgcccgcctcaagcagattatcggcgagcgcgaaatcgtcatgatc
gaagacaactgcgagtcgatgggagcgacgttcgagaaccgccaggccggtacgttcggg
atcatgggcagctacagcgcttttttctcgcaccatatctcgacgatggaaggcggcatg
atcgtcactgacgacgaggagctctaccacatccttctgtcgttgcgcgcgcatggctgg
actcgcaacctgccgaagttcaatcatgtgtgcggcgagaagagcgatgatccgttcaag
gaatcgttccgctttatgctgccaggctataacgtccgtccgctggagatgtcgggcgcg
atcggtattgagcaggtcaagcggttaccggagttgattcgcgcgcggcgcgccaatggc
gcattgcttcaagaagcgatggcaaaccatccggagttgatgatccaacgcgaaatcggc
gaaagcagctggttcgggttcagcctggtgattcgtcggggttcgtcgctgacgcgtgat
acgctcgtcaagcgactcaacgaagccggcttcgagtgccgccccatcgtggcaggaaac
tttgccaagaacgatgtcgtgaagtatttcgaccattcgattgccggggaattgcgaaac
gcggagcacatcgatcattccggcctgttcgttggcaaccatcactatccgattgaaagc
gccattaccgcgttgaggcaaatctaa
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