Pandoraea sp. XJJ-1: OYT13_24045
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Entry
OYT13_24045 CDS
T10414
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx00260
Glycine, serine and threonine metabolism
panx00630
Glyoxylate and dicarboxylate metabolism
panx00670
One carbon pool by folate
panx00785
Lipoic acid metabolism
panx01100
Metabolic pathways
panx01110
Biosynthesis of secondary metabolites
panx01200
Carbon metabolism
Module
panx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OYT13_24045 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OYT13_24045 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
OYT13_24045 (gcvP)
00670 One carbon pool by folate
OYT13_24045 (gcvP)
Enzymes [BR:
panx01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
OYT13_24045 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
WAL82769
UniProt:
A0A9E9IAS0
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Position
complement(5193804..5196731)
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AA seq
975 aa
AA seq
DB search
MNALTDLQAPRRSLSELEQRDNFSARHIGPDTPEQQAMLAELGYASRAALIDAVVPASIR
RDGARFAQSLGPFAAAQTESQALAQLRALASQNQVFRSFIGQGYANTFTPGVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIIDMTGLAIANASMLDEATAAAEAMTLVKRTG
KSKSNTFFVADDVLPQTIEVVQTRAKPLGFEVQVGPVAAAADVDAFGVLVQYPGVGGDVR
DYRALADAIHAKGGMLIAAADLLSLTLLTPPGEWGADVAVGNSQRFGVPMGFGGPHAAYL
ATRDELKRSMPGRLVGVSVDSQGKPALRLALQTREQHIRREKATSNICTAQALLAIMASM
YAAYHGPQGLRIIAERTHRLTAVLAAGLAALGAAPRNATFFDTLTVPVAGRADAVHTVAA
ARRFNLRREDADTVGISLDETSTRDDVIALWEVVAEGLGKSAVSLDFDAIETTVSNGYPV
ALARQSAYLTHPVFNRYHSEHEMLRYLRSLSDKDLALDRTMIPLGSCTMKLNATSEMLPV
TWPEFGQIHPFAPTEQTVGYRAMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIQA
YHASRGEAHRDICLIPASAHGTNPASAQMAGMQVVVVACDANGNVDLADLQAKAEQHRDR
LAAIMMTYPSTHGVFEAGARQICEIVHANGGQVYVDGANMNAMVGLCAPGEFGGDVSHLN
LHKTFCIPHGGGGPGVGPVAVGAHLAQFLPNQHSTGYSRDANGIGAVSAAPYGSASILPI
SWMYVAMMGAQGLTAATETAILNANYVAKKLAPHYPVLYSGPAGLIAHECILDLRPLKDT
SGITVDDVAKRLMDFGFHAPTMSFPVPGTLMVEPTESESKHELDRFIEAMIAIREEIRAV
EEGRADREDNPLKHAPHTADVVTADEWPHAYARSQAAYPVKSLRERKYWPPVGRADNVYG
DRNLFCACVPMSDYE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttgactgacctgcaagcgccgcgccgctcgctctccgagctggagcagcgc
gacaacttctccgcgcgccacatcggcccggacacccccgaacaacaggcgatgctcgcc
gagctgggctacgcgtcgcgtgccgcattgatcgacgccgtggtccccgcgtcgatccgt
cgcgacggcgcgcgcttcgcccagtcgctcggcccgttcgccgccgcgcaaaccgaatcg
caggcgctggcgcaactgcgcgcgctggccagccagaaccaggtgttcaggtcgttcatc
ggtcagggctacgccaacacgttcacgccgggcgtgatcctgcgcaacgtgctggaaaat
ccggcctggtacacggcctatacgccgtatcagccggaaatctcgcaaggccgtctcgaa
gcgctgctcaactatcagcagatgatcatcgacatgacggggctggcgatcgccaacgcg
tcgatgctcgacgaagcgactgccgccgccgaggcgatgacgctggtcaagcgtaccggc
aagtcgaagtcgaacacgttcttcgtcgccgatgacgtgttgccgcaaaccatcgaagtc
gtgcaaacgcgcgccaagccgctgggcttcgaagtgcaggtcggcccggtggccgccgcg
gccgatgtcgatgcgttcggcgtgctcgtgcaataccccggcgtgggcggcgacgtgcgc
gactatcgcgcgctggccgacgcgatccacgccaagggcggcatgctgatcgccgccgcc
gatctgctctcgctcacgctgctcacgccgccgggcgagtggggcgctgacgtcgccgtt
ggcaacagccagcgctttggcgtgccgatgggctttggtggcccgcacgccgcctacctg
gccacgcgcgacgaactcaagcgctcgatgccgggccgtctggtcggcgtgtcggtcgat
tcgcaaggcaagccggcgctgcgtctggcgctgcaaacgcgcgaacaacacatccgccgc
gagaaggcgacatcgaatatctgtactgcgcaggcgctgctcgccatcatggccagcatg
tacgccgcgtaccacggcccgcaggggctgcgcatcatcgccgagcgcacgcatcgtctg
acggccgtgctggccgccggcctcgccgcactgggcgccgcgccgcgcaacgccacgttc
ttcgacacgctgaccgtgcccgtggccggccgtgccgatgccgtgcacacggtggccgct
gcacgccgcttcaatctgcgtcgcgaagacgccgacactgtcggtatctcgctcgacgag
acgagcacgcgcgacgacgtgatcgccctgtgggaagtggtggccgagggcctcggcaag
agcgccgtctcgctggacttcgacgccatcgagaccaccgtctcgaacggctacccggtg
gcactggcgcgccaaagcgcgtatctcacgcacccggtgttcaaccgctaccactccgaa
catgaaatgctgcgctatctgcgcagcctgtccgacaaggatctggcgctcgaccgcacg
atgatcccgctgggctcgtgcacgatgaagctcaacgccacctcggaaatgctgccggtg
acgtggcccgaattcggtcagattcacccgttcgcgccgacggaacaaacggtcggctac
cgcgcgatgatcgaccagctcgaacagatgttggtggccgcgactggctacgccgccgtc
tcgctgcagccgaacgctggctcgcagggcgagtacgccggtttgctcatcattcaggcg
tatcacgcatcgcgcggcgaagcgcatcgcgacatctgcctgattcccgcgtcggcgcac
ggcacgaacccggcgtcggcccagatggccggcatgcaggtcgtggtggtcgcttgcgac
gccaacggcaacgtcgatctggccgatctgcaggcgaaggccgagcagcatcgcgaccgt
cttgccgcgatcatgatgacgtacccgtccacgcacggcgtgttcgaagccggcgcgcgc
cagatctgcgagatcgtgcatgcgaacggcggtcaggtgtatgtcgacggcgcgaacatg
aacgccatggtcggcctgtgcgcaccgggcgaattcggcggcgacgtttcgcacttgaac
ctgcacaagacgttctgcattccgcacggcggcggcggcccgggcgtgggtccggtcgcg
gtgggcgcgcatctggcgcagttcctgccgaaccagcactcgacgggctactcgcgcgac
gccaacggcatcggtgccgtgtcggccgcgccgtatggttccgcctcgattctgccgatc
tcgtggatgtacgttgccatgatgggcgcgcagggcctgacggccgccaccgagacggct
atcctgaacgcgaactacgtcgcgaagaagctcgcgccgcactacccggtgctgtacagc
ggcccggccgggctgatcgcgcacgagtgcattctggatctgcgtccgctcaaggacacc
agcggcatcacggttgacgacgtggcgaagcgcctgatggacttcggcttccacgccccg
acgatgagcttcccggtgccgggtacgctgatggtcgagccgacggaatcggaatcgaag
cacgaactcgaccgcttcatcgaggcgatgatcgcgattcgcgaggaaatccgtgccgtg
gaagagggccgtgccgatcgcgaggacaacccgctcaagcacgcgccgcacacggcggac
gtggtgacggcggacgaatggccgcacgcctacgcccgcagtcaggcggcgtacccggtg
aagtcgctgcgcgagcgcaagtactggccgccggtcggacgtgctgataacgtctacggc
gaccggaatctgttctgcgcctgcgtgccgatgagcgactacgaataa
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