Paenarthrobacter sp. NyZ202: ACPFL9_06760
Help
Entry
ACPFL9_06760 CDS
T11214
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pany Paenarthrobacter sp. NyZ202
Pathway
pany03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACPFL9_06760 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pany03400
]
ACPFL9_06760 (mfd)
Enzymes [BR:
pany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACPFL9_06760 (mfd)
DNA repair and recombination proteins [BR:
pany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACPFL9_06760 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRQ35310
LinkDB
All DBs
Position
1432091..1435723
Genome browser
AA seq
1210 aa
AA seq
DB search
MSLNGLRRALAEDKTFARVRTEAGRPFASRSTDYQISAPTGMRSVLLAEMADALAGGPEN
PVVLAVTATGREAEDLTAALASYLPAESVATFPSWETLPHERLSPRSDTVGRRLSVLRRL
AHPESSTAAALRVVVAPVRAVVQPIVAGLGDLVPVTLKVGQERSFTDVVRALSDAAYARV
DMVTHRGEFAVRGGILDVFPPTEDHPIRVEFFGDEVDQMRWFAVADQRSLSAPGIHHPTE
LHAPPCREILITPSVMSRAAKLKADMPAAADMLEKIAGGIAVEGMESLAPVLVDAMVPFV
DQLPAGSLTVVIEPEKVRTRAHDLAATNEEFLEAAWSTASDGGTAPLALDTALLSRASTD
LHAASFRSLTDTRSSALAHDVSWWSITSLASDEDLVLDIDVLNLHAREPRGYQGDVAEML
DFIGGRVRDQWRVVVVTDGPGPAQRLAELFHDADIPCSRVDSLDTEPQPGIIEVTCAAVG
RGFVLDGLKLGLLTEADLLGRASASSTKDMRRMPSKRRNAVDPLQLHAGDFVVHEQHGIG
KFVELIQRKVAGTSASDAGLREYLVLEYAPSKRGAPGDRLFVPTDQLDQVTRYVGGDTPA
LSKMGGADWASTKSKARKAVKEIAGELIRLYSARMASRGHAFAPDTPWQRELEEAFPYVE
TPDQLTTINEVKADMEREIPMDRLVSGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLL
AQQHYETFTERFSGFPLRVKPLSRFQTSKEAKETAEGVKNGSVDVVIGTHRLLSKDFEFK
DLGLVIVDEEQRFGVEHKEALKKMRTNVDVLAMSATPIPRTLEMSLTGIRETSTLATPPE
ERHPVLTYVGPFTNKQTSAAIRRELMREGQVFFVHNRVSSIERVAAQIRELVPEARVEVA
HGQMSESRLEKIIVDFWEKRFDVLVCTTIIETGLDISNANTLIVDGADKYGLSQLHQLRG
RVGRGRERAYAYFLYPSEKPLGEVALERLKAVAAHNELGAGMQLAMKDLEIRGAGNLLGG
EQSGHIQGVGFDLYIRLVGEAVAEYRGEAEEKAAEMKIELPVNAHLPHDYVPGERLRLEA
YRKLAAAVTNEAIDEVLAELVDRYGEPPLPVQNLIAVARFRVGAREAGLSDVALQGNFIR
FSPAQLPESKVMRLNRMYPGSQVKPALDAVLIPKPKTARIGGRDLQDAQILEWANSVIEA
IFTDVPVKAG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaacggtctgcgccgcgcgttggcggaggacaagacttttgcgcgcgtccgg
acagaggctgggcggcctttcgcgtcgcgcagcacggactaccagatcagcgcgccgacg
ggcatgcggtctgtcctgctcgctgaaatggccgatgccctggccggtggcccggaaaac
cccgtggtgcttgccgtgacagccaccggccgcgaggccgaggacctgacggccgcgctc
gcctcctaccttccggcagagtcagtggccaccttccccagctgggagaccctcccgcac
gaacggctttcgccgcgttcggacaccgtggggcgccggctttccgtcctgcggcgcctg
gcccatccggaaagctcgacggcggcggcgttgcgtgtggtggttgctcccgtccgcgcc
gtggtccagccgattgtggccgggctgggtgacctcgtccccgtcacgctgaaggtgggc
caggagcgatccttcaccgacgtggtcagggcactgtccgacgccgcctacgcccgcgtg
gacatggtgacccaccgcggcgaattcgcagtccgcggcggcatcctcgatgttttcccg
cccaccgaggaccacccgatccgcgtggagttcttcggcgacgaggtagaccagatgcgc
tggttcgcggtcgccgaccagcgctcgctgtccgcccccggtatccaccaccccaccgaa
ctgcatgcaccgccgtgccgcgaaatcctcatcacgccctcggtcatgtcccgtgcggcc
aagctgaaggcagacatgcctgccgcggcggacatgttggagaagatcgccggtgggatc
gccgtggaaggcatggagtccctggcgccggtcctggtggacgccatggttccgttcgtg
gaccagcttccggcaggttcattgaccgtggtgatcgaaccggagaaggtgcgcacgcgc
gcacacgatctcgcggcgaccaacgaagaattccttgaggcggcctggtcaacagcgtcc
gacggcgggaccgcacctttggcgcttgacactgccctgttgtcccgcgcctccacggac
ctgcatgcggccagtttccgttccctcacggacacccgttcctctgccctggcacacgat
gtgtcctggtggtccatcacctcactggcatccgacgaggacctggtcctcgatatcgac
gtcctcaacctgcatgcccgggagccgcgcggataccagggcgatgttgcggagatgctg
gacttcatcggtggccgggtccgtgaccaatggcgcgtggtggtggtgacggatggcccg
ggccccgcgcagcgcctggccgagttgttccacgacgccgacattccgtgcagccgcgtg
gattccctggacacagaaccccagccgggaatcatcgaggtgacctgtgccgccgtcggg
cgtggctttgtgctggacggcctcaaactgggcctcctcaccgaagccgaccttctcgga
cgcgcgtccgcaagctccaccaaggacatgcgccggatgccgtccaagcggcggaacgcc
gtggatccgctgcaactgcacgcaggcgacttcgtggtccacgagcagcacggcatcggc
aagttcgtggaactcatccagcgcaaggtggcgggaacgtcggcctcggatgcgggcctt
cgcgagtaccttgtcctggagtacgcgccctccaagcgtggcgctcccggcgaccggctg
ttcgttcccacggaccagctggaccaagtgacccgctacgtcggcggcgatacaccggcg
ctgagcaagatgggcggcgcggactgggccagcaccaagtccaaggcccgcaaggccgtc
aaggaaatcgcgggcgaactgatccgcctgtactcggcccgcatggcctcccgcggacac
gccttcgccccggacaccccgtggcagcgtgaacttgaggaagcattcccctacgttgag
accccggaccagttgaccaccatcaacgaggtcaaggcggacatggaacgcgaaatcccc
atggaccggctggtgtccggcgacgtgggctacggcaagaccgagatcgctgtccgtgct
gccttcaaagccgtccaggacgggaagcaggtggcggtcctggtgcccaccaccctcctg
gcccagcagcactacgaaaccttcactgagcggttctccggcttccccctgcgggtcaag
ccgctgtcccgcttccagaccagcaaggaagcaaaggagacggcggagggcgtcaagaac
ggctccgtggatgtggtgattggaacccatcgcctgctgtccaaggatttcgagttcaag
gaccttggcctggtgatcgtggacgaagagcaacggttcggcgtggagcacaaggaagcg
ctcaagaagatgcgcaccaacgtggacgtgctggccatgagtgccacgccgatcccgcgt
accctggaaatgtccctgacgggtatccgcgagacctccaccctggccacgccgccggaa
gaacgccatcccgtgctgacatacgtcggtcctttcaccaacaagcagacctcggcagcc
atccggcgtgagctcatgcgcgaagggcaggtgttcttcgtgcacaaccgggtctcctcg
atcgagcgcgttgccgctcagatccgtgaactggttcccgaagcccgggtggaagtggcc
cacggccagatgtccgagagccgcctggaaaagatcatcgtggacttctgggagaagcgc
tttgacgtcctggtgtgcaccaccatcattgagaccggcctggacatctccaacgccaac
acgctcatcgtcgacggcgcggacaaatacgggctgtcccagctccaccagctccgtggc
cgcgtgggccgtggccgcgagcgggcctatgcctacttcctctacccctcggagaagccg
ctgggcgaggtggcactggagcgtctcaaggccgtggcggcgcacaacgaattgggcgcc
ggcatgcagttggccatgaaggacctggagatccgtggtgcaggcaacctgctcggcggt
gagcagtccggccacatccagggtgtgggtttcgacctttacatccgtctggtgggcgag
gctgtggccgagtaccggggcgaggccgaagaaaaggctgcagaaatgaagatcgagctg
cccgtcaacgcgcacctgccacatgactatgtgcccggcgaacggctccggctcgaggcg
taccggaagctggccgctgcggtgacgaacgaggccatcgacgaggtcctggccgagctc
gtggaccgctacggtgagccgccgctgcctgtgcagaacctcattgccgtggcccgcttc
cgtgtgggcgcgcgcgaagccggcctgtccgacgtcgcgctccaaggcaacttcatccgc
ttctcgccagcgcaactgcctgaatccaaagtcatgcgcctcaaccgcatgtacccgggt
tcgcaggtcaagcccgcgcttgacgctgtcctcattccgaagcccaagaccgcccggatc
ggtggccgcgacctgcaggacgcccagatcctcgagtgggccaatagcgtgatcgaggcc
atcttcaccgacgtacccgtaaaggctggctag
DBGET
integrated database retrieval system
