Paenarthrobacter sp. NyZ202: ACPFL9_08505
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Entry
ACPFL9_08505 CDS
T11214
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pany Paenarthrobacter sp. NyZ202
Pathway
pany03030
DNA replication
pany03430
Mismatch repair
pany03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPFL9_08505 (dnaE)
03430 Mismatch repair
ACPFL9_08505 (dnaE)
03440 Homologous recombination
ACPFL9_08505 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pany03032
]
ACPFL9_08505 (dnaE)
03400 DNA repair and recombination proteins [BR:
pany03400
]
ACPFL9_08505 (dnaE)
Enzymes [BR:
pany01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACPFL9_08505 (dnaE)
DNA replication proteins [BR:
pany03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACPFL9_08505 (dnaE)
DNA repair and recombination proteins [BR:
pany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACPFL9_08505 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XRQ35641
LinkDB
All DBs
Position
1837996..1841553
Genome browser
AA seq
1185 aa
AA seq
DB search
MSSSNDSFVHLHTHTEYSMLDGAARLGELFDETERLGMPALATTDHGYLFGAFDFWRKAT
DKGIKPIIGVEAYVTPGTARGDKERVRWGDESQRKDDVSGGGSYTHMTLLSYNNVGMRNL
FRASSIASLDSVFGKWPRLDRELLNTYSEGLIATTGCPSGEVQTRLRLGQYREALEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKDLNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDQGGSRFAFSGSGYYLKSPQEMRELFRDHPEACDNTLLIAERCDVS
FNTDANYMPRFPCPPGEDETSWLVKEVDKGLAYRYPQGVPDTVRKQADYELEVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLQHGLIFERFLNPDRVS
MPDFDVDFDDRRRSEVIDYVTRKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGEQ
LTKALPPAVMAKDIPLADIQNPEAKRYSEAGDFRQLIATDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDA
LENVKMNRGIDIDLENLALDDAASYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNGIQDVVPIHPELAEPLEDILGGTFGLIVYQEQVMAV
AQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMEAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESSLNFTPVGDDIRFGMGAIRNVGVNVVEAMVSARQTEGAYTSFKDFLMKVPAIVC
NKRTIESLIKAGAFDSLGHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFEDQEPEA
SLSTEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGVLSQHAEQSITSIIAEDGPHD
GAIVTIAGMITSLSRRIAKASGNAYARAEIEDLGGSMEVMFFGQVYGPIASVLAEDLIVV
VKGRLQRRDDGAVTLNCMELSVPDLSESVNGPVVITIPTFKATEAVVTDLRDVLRTHRGN
SEVRLKLMGDTKMEIMALPVHMRVNPSPSLFGDLKVLLGPACLDH
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccagcaatgattcgttcgtccatctgcacacccataccgaatactccatgctg
gatggagcggcccgcctgggtgaactcttcgatgagactgagcgcctgggcatgcccgct
ttggccacgacggaccacggctaccttttcggcgccttcgacttctggcggaaggcaact
gacaaaggcatcaaacccatcatcggcgtagaggcgtacgttacgccggggacggcacgc
ggtgacaaggagcgtgtgcgctggggtgatgaaagccagcgcaaggacgatgtctccggc
ggtggttcgtacacccacatgaccctgctcagttacaacaacgtaggcatgcggaacctg
ttccgggcatcctccattgcctcgctcgactcggtcttcggtaaatggccgcggctggac
cgggaactcctcaacacctactccgagggtcttatcgctacgaccggctgcccatcaggg
gaggttcagacccggctgcgcctgggccaataccgcgaagcgctggaagccgcggccgag
ttccgggacatattcggcgcggagaactacttttgcgagctgatggaccatgggctggac
atcgagcggcgcgtcaccggcgacctcctgaggctcgccaaggatctcaaccttcccctc
gtggccacgaacgacctccattacacccacgagcacgatgccaaagcccacgaggcactg
ttggccatccagtccgggtcgaccctcctggagcccacctacgaccaaggcggttcgcgg
ttcgccttctccggcagcggctactatctgaagtcgccgcaggaaatgcgggagctcttc
agggaccacccggaagcctgtgacaacacattgctcattgccgagcgctgcgatgtgtcc
ttcaatactgacgccaactacatgccccgtttcccctgcccgcccggtgaggacgagaca
tcctggctggtcaaggaagtggacaaggggctggcctaccggtatccccagggcgtcccg
gacactgtccgcaagcaggcggactacgagctcgaggtcattacctccatgggcttcccg
ggctacttcctggtcgtcgccgacttcatcaactgggcaaagaacaacggcatccgggta
gggcccggccgaggctccggtgccggttcaatggttgcctacgccatgcgcatcacggat
cttgatccgctgcagcacggcctgatcttcgagcgcttcctcaacccggaccgtgtgtcc
atgcctgacttcgacgtcgacttcgatgatcgcaggcgctcggaagtcattgactacgtc
accaggaaatatggtgatgagcgcgtggccatgatcgtgacgtacggcaccatcaagacc
aaacaggcgctgaaagactcttccagggtgctgggctaccccttcagcatgggggagcag
ctcaccaaggcgctgccgcctgcagtgatggccaaggacattccgttggcggacatccag
aacccggaggccaagcggtacagcgaggccggtgacttccggcaactgatcgccacggac
ccggaggctgccaaagtcttcgaaaccgcgcttggcatcgaggggctgaagcggcagtgg
ggtgtccacgcggccggcgtcatcatgtcctccgaccccatcatcgacgtcattccgatc
atgcgccggttccaggacggccaggtcatcacgcagttcgattaccccacgtccgagggc
ctgggcctgatcaagatggacttcctggggctgcggaacctgacgatcatttccgacgcc
ctggaaaacgtcaaaatgaaccgcggtatcgacatcgaccttgaaaaccttgccctggat
gacgcggcgtcctacgaactcctcgcccgcggagacaccctcggcgtgttccagctggac
ggcggacccatgcggtcgctgctcaaactgatgaagccggacaacttcgaagacatctcc
gcagtgctggcgctgtaccgtcccggcccgatgggcgccaacgcgcacacggactatgcg
ctgcgcaagaacgggatccaggacgtggtcccgatccatcccgagcttgccgagccgctg
gaagacatcctcggcgggacgttcggcctgatcgtgtaccaggaacaggttatggccgtg
gcccagaagcttgcgggctactcgctgggccaggcagatattctccgccgtgccatgggc
aagaagaagaaatccgagctggacaagcagttcgccggcttctcccagggcatgcaggac
aacggctactccatggaagccgtcaaaacgctgtgggacatcctgctgccgttctccgat
tacgccttcaacaaggcgcactcggcagcctacggcgtgatctcctattggacggcctat
ttgaaggcacactatgcgcccgagtacatggccgcgctgctgacgtcggtaggcgatgat
aaggacaagtcagccatctacctcaatgaatgccgacgcatgggcatcacggtgcttccg
ccggacgtcaatgaatcctccctgaacttcacgcctgtgggcgacgacatccgcttcggc
atgggtgccatccggaacgtgggcgttaacgtcgtggaggccatggtctccgcccggcag
accgaaggcgcgtacacctcattcaaggacttcctgatgaaggttccggcgatcgtgtgc
aacaaacgcaccattgaatccctcatcaaggccggagccttcgattcgctgggccaccac
cgccgtgcactggccatgatccatgaagaagccatcgactccgtcatcacgctgaagcgg
aacgaggccatcggccagttcgacctcttcgccgggtttgaggaccaggagcccgaggcc
tcgctgagcaccgagatcccggacctccccgagtgggagaagaaggacaaactctcgttt
gaacgcgacatgctgggtttgtatgtgtccgaccacccgctgcaaggactcgagggcgtc
ctgagccagcatgcggaacagtccattacctcgatcatcgccgaggatggaccgcacgac
ggcgcgatcgtcaccattgcgggcatgatcacctcgttgagccgaaggatcgccaaggca
agcggcaacgcctatgcgcgggccgagatcgaggatctgggcggctcgatggaggtcatg
ttcttcggacaggtctacggacccatagcctcggtcctggccgaggacctcattgtggtg
gtcaagggccgtctgcagcgcagggatgacggcgccgtgacgctgaactgcatggagctg
tccgttcccgacctgagcgaaagcgtcaacggacctgtggtgatcaccattccgacgttc
aaggccaccgaagccgtggtcacggatctgcgtgatgtgctccggacccaccgcgggaac
tccgaggtccggctcaagctcatgggtgacacgaagatggagatcatggctctgcccgtg
cacatgcgcgtcaaccccagcccctcactctttggcgacctgaaggtcctgctgggcccg
gcctgcctggaccactag
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integrated database retrieval system
