Paenarthrobacter sp. NyZ202: ACPFL9_08660
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Entry
ACPFL9_08660 CDS
T11214
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
pany Paenarthrobacter sp. NyZ202
Pathway
pany02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pany00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACPFL9_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pany03021
]
ACPFL9_08660
Transcription machinery [BR:
pany03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPFL9_08660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
XRQ35672
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All DBs
Position
1877317..1878636
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AA seq
439 aa
AA seq
DB search
MTPSSVEKELAAQAELSAEEKKAATSAKRAATRAANKPGEGNSDKPAPKKRGPKPGAKAA
AESAAAPGDVDEDTDDVTVEDEDFDPAAAEEVEVSDDDADDTSDAPKDKPAPTGSGFVYS
DADDDDAPVQQVMSAGATADPVKDYLKQIGKVALLNAEQEVDLALRIEAGLFAEEKINND
DGSMDPKLRRELEFVIHDGKRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLI
RAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQD
LGREPTPEELALELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPAD
AVSFTLLQEQLHSVLDTLSEREAGVVAMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESK
TMSKLRHPSRSQVLRDYLD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccgtcttccgtcgagaaggaacttgccgcccaggccgaactgtccgctgaggaa
aagaaggcggccacttcggcaaagcgggcggcaacccgtgccgccaacaagcccggagag
ggcaattccgacaagccggctcccaagaagcgtggacccaagccgggcgccaaggccgca
gcagaatccgctgctgctcctggcgacgtcgatgaagacaccgacgacgtcactgtcgag
gatgaggacttcgaccctgctgccgctgaagaagtggaagtaagcgacgacgacgccgat
gacacctccgatgcccccaaggacaagcccgctcccaccgggtccggattcgtctactcg
gacgcggacgacgacgacgcccccgtccagcaggttatgtcagccggcgctaccgctgac
cccgtcaaggactacctgaagcagatcggcaaggttgcgctgctgaacgccgagcaggaa
gtcgacctcgcgctccgcatcgaggccggcctgttcgccgaagagaagatcaacaacgac
gacggctccatggatccgaagctgcgccgtgaactcgagttcgtgatccacgacggcaag
cgtgcaaagaaccacctgcttgaagccaaccttcgcctggtggtgtcgctggccaagcgc
tacaccggtcgcggcatgctgttcctcgatttgatccaggaaggcaacctcggcctcatc
cgggccgtggagaagttcgactacaccaagggcttcaagttctccacctatgccacatgg
tggatccgccaggccattacccgtgccatggccgaccaggcacgcaccatccgtattccg
gtacacatggtggaagtcatcaacaagctggcgcgcgtccagcgccagatgctccaggac
ctcggccgtgaacctacgccggaagaactggcactggaactggacatgactcccgagaaa
gtcgtggaggtccagaagtacggccgtgagccgatctccctgcacacccccttgggtgag
gacggcgactccgaattcggcgacctcatcgaagactcggaagccgttgttccggctgac
gccgtcagctttacgctgctccaggaacagcttcattccgtcctggacaccttgtccgag
cgggaagcaggggtcgttgccatgcgcttcgggttgaccgatggacagccgaagacttta
gacgaaatcggcaaggtctacggagtgacgcgcgaacgcatccgccagatcgaatccaag
accatgtccaagctccggcacccttcgcggtcgcaggttctgcgggactacctggactag
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