Paenarthrobacter sp. NyZ202: ACPFL9_13985
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Entry
ACPFL9_13985 CDS
T11214
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pany Paenarthrobacter sp. NyZ202
Pathway
pany03420
Nucleotide excision repair
pany03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACPFL9_13985
03430 Mismatch repair
ACPFL9_13985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pany03400
]
ACPFL9_13985
Enzymes [BR:
pany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACPFL9_13985
DNA repair and recombination proteins [BR:
pany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPFL9_13985
MMR (mismatch excision repair)
Other MMR factors
ACPFL9_13985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRQ32715
LinkDB
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Position
complement(3024588..3028133)
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AA seq
1181 aa
AA seq
DB search
MTIDLLEGADLNGALAPEPGPDLPKPRFSPAGLAAILGEKNSPTDEQSGIIASPLTPRLV
IAGAGSGKTATMADRVVWLVANGWVRPEEVLGVTFTRKAAGELATRIRSKLATLQRIAAE
DDGSIGFPEGISSATDLEPKVSTYHSYASGIVADYGLRLGVEKDVVLLGQAQSWQLASEV
VEAYDGDFEHFRAAKSTLVNAVMQLAGECAEHLQDPGAVRDWVLDRVATFEQLPYLATAK
KNPTQGALDLAGLLRTRASVADMVVRYQQAKRQRGVLDFGDLVALAARIASEIPVAAAAE
RARYKVVLLDEFQDTSHAQLVLFSRLFGQGHAVTAVGDPNQSIYGFRGASAGQLFHFVQE
FPVKTANPTTGTVSYGVAPTSYLTTAWRNGRNILAAANMIAAPLNRAVATTSGPGSPAGS
GPHGGGVPALVPSPAATDGVVSMGRFVTDEDEASAIARDVQRYQRTVFEEEKDGTPVRPT
LAVLCRRRAQMESLRREFELQGIAYEIVGLGGLLDTPEVVDLVATLRVLADPGRSDSLMR
LLAGARWRIGPADLMAFHDWSRFLARRRETHADDSPADQPEDAAVVVESDITDASSLVEA
LDFLPKPGWTSAQGRTLGPIALARLQSLAAELRTLRTFVGDDLTTLLNEVERSMLLDIEV
AAKPGVSIHQARRNLDAFQDAAAGFLQTSQRIDLLAFLSWLEAAASEEGGLDVAPAETNR
EAVQLLTVHASKGLEWDVVFVPGLNDGSFPSNRDSRWTSGAAALPWPLRGDRADLPQWDT
DQPDQKGWLDAEKVFKADVQAHGEAEERRLAYVAYTRAKFVLWVSSAAWNGSRAGIAGMS
PFLAELAPLAGVGETAERPSGMAGSAAVVHPQSVAEDFLPGSSPLTSVLEVAEFPYDPLE
GPIDPRTGHRLRLVPGRRAAMDRAAGLVREFMEQPGNGAASTDLPGIAGKWSAEADLLLD
RQRGRNLGQDVHLPSHISASLFVDLGADPSGVLARLRRPVPREPGMSARQGTAFHAWVEE
YFGTAGMLDLDEAPGSDAHIDEAYGLDQMVAAFKKSEWAHREPAFIEVPVETRIGDVVVR
GRIDAVFQDADGQWQLIDWKTGRRPTGQQLAIRSVQLAVYRLAWARLKGVPLEEVSAAFY
YVAEDAVVRPHDLGTAEDLERIIVGALSRQRSAETVERVTP
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgatctcctggagggagcagacctcaacggagctttggcaccggaacccgga
ccagacctgccgaaaccccggttctccccggcaggactggccgcgatccttggtgaaaag
aacagtcccaccgacgagcaatcgggcatcatcgcttctccgctcacaccgcgcctggtc
atcgccggtgccggttccggcaagacagccaccatggcggaccgtgtggtgtggctcgtg
gccaatggatgggtccgtcccgaggaagtcctgggcgtgaccttcactcgcaaggccgcg
ggggaactcgctacccgtatcaggtccaagctcgccacgctccagcgaatcgccgctgaa
gatgatggatccatcggattcccggagggaatttcaagtgccacggaccttgagcccaaa
gtatccacctaccattcctacgccagcggcatcgtcgccgattatggtttgcgtctcggg
gtggaaaaggatgtcgtcctgttgggtcaggcccagtcctggcaactggccagcgaggta
gttgaagcctacgacggcgatttcgaacatttccgtgccgccaagtccaccttggtcaat
gcggtcatgcaactcgccggagagtgcgccgaacatttgcaggatcccggcgcggtccgg
gattgggtgcttgaccgcgttgccaccttcgaacagttgccgtatctcgccaccgccaag
aagaaccctacgcaaggtgcacttgatctcgcgggcttgctgcggacacgtgccagcgtc
gccgacatggtggttcgctaccagcaagccaaacgccagcgtggcgtcctggatttcggt
gacctcgtggccctggccgcccgtattgccagtgagatccctgttgcggccgcagccgaa
cgcgcgcgctacaaagttgtgctcctggatgagttccaggacacgtcccacgcccaattg
gtgctgttctcgcggctcttcggccagggccatgccgtgacagcggtgggggaccccaac
cagtccatctatgggttccggggtgcttccgccggccagctcttccatttcgtgcaggag
tttccggtcaagactgccaaccccaccacggggacagtgtcctacggcgtcgctccgacg
tcctatctgaccactgcatggcggaacgggaggaacatcctggcggcagccaacatgatt
gctgcgcctttgaaccgggcagtcgcaaccacgtccggcccgggaagtcccgccggttca
ggtcctcatggtggcggggtgccagctctcgtgcccagccctgccgcaacggacggcgtg
gtatccatgggtcgctttgtcaccgacgaagacgaagcctccgccatagcccgggatgtg
cagcgttatcaacgaaccgtgttcgaagaggagaaggacggaaccccggttaggccgacc
ctggctgtgctgtgccgaaggcgtgcccagatggaaagcctccgccgcgagttcgaactc
cagggaatcgcctacgaaatcgtgggtttggggggactcctcgatactccggaagtcgtg
gacctggtggcaacactgagggtcctggccgaccccggacgttcagattccttgatgcgg
ctccttgcgggtgcccgctggaggatcggcccggcggacctgatggcctttcatgattgg
tccaggttcctcgcgcgcaggcgcgaaacccacgccgatgattccccagccgaccaaccc
gaggacgcagcagtcgtggtggagagcgacatcacggacgcgtccagcctggtagaagcc
ttggacttccttcccaagccggggtggacgtcagcgcagggcaggaccctggggccgatc
gccctggcgcggttgcagtccttggctgccgagcttcggacgctgcgaacatttgtcggt
gacgacctcacgacgctcctcaatgaggtcgaacgttccatgctgctggacattgaagtc
gctgccaagccgggtgtcagcatccaccaggcgcgccggaacctggatgcgttccaggat
gcggctgccgggttcctccagacgtcccaacggatcgatctcctggcattcctgtcctgg
ctggaagctgcagcgtccgaagaaggcgggttggacgtggcgccggcggagaccaaccgc
gaagccgtccagttgctgaccgtccatgcctccaaaggcctggaatgggatgttgtcttc
gtgccggggctcaatgacggctcctttcccagcaacagggactcccgctggaccagcggg
gcggccgccttgccgtggcctctccggggtgaccgggctgatcttccccagtgggacact
gaccagccggaccaaaagggctggttggatgcggagaaggttttcaaagccgatgtccag
gcgcacggtgaagccgaggagagacgtcttgcatatgtggcctacacccgggccaaattc
gtgctgtgggtttccagcgcggcgtggaacggttcacgtgccggcatcgccgggatgtcc
ccgttcctcgctgaactggcacccctggccggtgtcggggagaccgcggaacgcccgtcc
gggatggcgggatcagcagctgtggtgcatccgcagtcagtcgcagaggacttcctcccc
ggcagcagcccgctaaccagcgtcctggaagtcgcggaattcccctacgaccccttggaa
ggccccatcgacccacggaccggtcaccgcttgaggcttgttccgggccgacgcgccgcc
atggaccgtgccgctggtctggtgagggagttcatggaacagcccgggaacggtgcggca
tcaacagatctcccgggaattgcgggcaagtggtccgcggaagccgacttgttgcttgac
cgccagcggggacggaaccttggccaggacgtacatctgccgagccatatctctgcctcg
ctcttcgtggacctgggcgcggacccgtccggcgtgctcgcacggttgcgccgacccgtt
ccacgggagccggggatgtcggcgcgtcaaggtaccgcgttccatgcctgggtggaagag
tatttcggcaccgcgggaatgctggaccttgacgaggccccgggctcggacgcccatatc
gatgaggcctatggcctcgaccagatggtggccgcgttcaaaaagtcggagtgggcccac
cgtgaacccgcctttatcgaggttcccgtcgaaacgaggatcggcgacgtcgttgtccgc
ggccgcatcgacgccgtgttccaggatgcggacggccagtggcaattgatcgactggaag
acgggacgacgccccacgggccaacaactggccatccggtcagtccagttggctgtgtac
aggcttgcatgggcgaggctgaaaggcgtgccgctggaggaagtcagcgcggcgttttat
tacgtcgccgaggacgccgtggtccggccgcacgatcttggcacggcggaggatctcgag
cggatcatcgtcggcgccctcagcaggcagcgttctgcggagaccgttgagcgagtgacg
ccttga
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