Paenarthrobacter sp. NyZ202: ACPFL9_16560
Help
Entry
ACPFL9_16560 CDS
T11214
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pany Paenarthrobacter sp. NyZ202
Brite
KEGG Orthology (KO) [BR:
pany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pany03032
]
ACPFL9_16560 (topA)
03400 DNA repair and recombination proteins [BR:
pany03400
]
ACPFL9_16560 (topA)
Enzymes [BR:
pany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACPFL9_16560 (topA)
DNA replication proteins [BR:
pany03032
]
Prokaryotic type
DNA Topoisomerases
ACPFL9_16560 (topA)
DNA repair and recombination proteins [BR:
pany03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACPFL9_16560 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
XRQ33207
LinkDB
All DBs
Position
complement(3577891..3580614)
Genome browser
AA seq
907 aa
AA seq
DB search
MPSKAKTGKKLVIVESPAKSKTIAKYLGEGFIVEASIGHIRDLPQPSDLPAELKKTSLGK
FAVDIENDFKPYYVVSPDKKKKVAELKAQLKDADALYLATDGDREGEAIAWHLLEVLKPK
VPVYRMTFGEITKEAIHRAMDNLRDVDTALVDAQETRRILDRLYGYEISPVLWRKVARGL
SAGRVQSVVTRMVVDRERERMAFRAASYWDLTGQFGADAGSFKAKLAAVDGAKVASGRDF
NDNGQLTSSNVVHLNEELATSLAANLEKSDFRVRSVDTKPYTRRPAAPFTTSTLQQEAGR
KLRFSSKSTMQVAQRLYENGYITYMRTDSSALSDEAVTAARRQAAELYGPEYVPQSPRIY
ANKSANAQEAHEAIRPAGDSFRTPAQVAQQLSGDEFRLYELIWKRTVASQMADAKGSTAT
IRLGAVSADGRDAEFSASGTVITFPGFLAAYEEGKDESRGDDDSDEARRLPNVAKDDQLS
ASEIVAVGHETSPPPRYTEASLTAELEKKGIGRPSTYASTISTIQDRGYVRKQGSALVPS
WIAFSVIRLLEQHFTDYVDYEFTADMEGDLDKIANGQEAGAAWLRHFYYGEDADPGLLSI
VNNLGEIDAREINSVPIAEGITLRVGKFGPYLESSIPTVDEKTGEVVESARANVPEELAP
DELTAAKAIELMETAAPEERVLGTDPHTGHTIVAKNGRYGAYVTEIIPEMTEEQLAAQPV
EYYKNGKPKPPKKPVKAKPRTGSLFKSMSVDTVTLDEALQLMSLPRVLGEDAEGTPITVQ
NGRFGPYLKKGTDSRSIGSEEEIFTITLDQALEIYSQPKQRGARAAVPPLAEFGPDPVSE
KNIVVKEGRFGPYITDGITNITVPRSTSLEELTRERAVELLAEKRAKGPVKRTTTRKAPA
RKAAAKK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagcaaggcaaaaaccggcaagaaactcgtgatcgtggagtctccggccaagagc
aagaccatcgccaagtaccttggcgagggcttcatcgtcgaggcatccatcggccacatc
cgtgacctcccgcagccgtcagacctccctgcagaactgaagaagacgtcgctgggcaag
ttcgctgtcgatatcgagaacgacttcaagccgtactacgtggtttcgccggataagaag
aaaaaggttgccgaactcaaagcccagctgaaagacgctgatgcgctttacctcgcaacc
gatggggaccgcgaaggcgaggccatcgcgtggcacctcctggaggtcctgaagcccaaa
gtccccgtgtaccggatgacctttggcgaaatcaccaaagaggccattcaccgcgccatg
gacaatctgcgcgacgtcgacaccgcactggtcgatgcccaggagacccgtcgtatcctt
gaccgtctctacggctatgaaatttcccctgtcctgtggcgaaaggtggccaggggcctt
tcggcaggccgtgtgcagtccgtggtgacccgcatggtggtggaccgtgagcgcgaacgc
atggcgttccgtgccgcttcctactgggacctgacgggccagttcggcgcggatgccgga
tccttcaaggcaaagctggccgccgtggacggtgccaaggttgccagcggcagggacttc
aacgacaacggccagctcacctcctccaacgtggtgcatctcaatgaggaactggccacc
tcgctcgcggcaaacctggagaagtcggacttccgggtccggtccgtcgacaccaaaccg
tacacgcggcggccggctgcgccgttcaccacctccacgctgcagcaggaggccggacga
aagctgcgcttctcgtccaagagcaccatgcaggtagcgcagcgcctctacgaaaacggc
tacatcacgtatatgcgtaccgactcgtccgccctgagcgacgaggcagtcacggctgcc
cggcgccaggcggcagagctgtacggcccggaatacgttccgcagagcccccgcatctac
gccaacaagtcggccaatgcccaggaagcccacgaggccatcaggcctgcaggagactcc
ttccgcactccggcccaggtggcgcagcagttgagcggagatgagttccggttgtacgag
ctcatttggaagcggaccgtggcctcccagatggccgatgccaagggttccacggctacc
atccggcttggcgcggtctccgcagatggccgggacgcggaattctccgcttcgggtacc
gttatcaccttccccggcttcctcgctgcctacgaagaaggcaaggacgagagccgcggc
gacgatgattccgatgaagcccgccgcctgcccaacgtagccaaggatgatcaactgtcg
gcctcggaaattgttgcagtaggccacgagacatcgccgcccccgcggtacacggaagcc
tccctgacggcagagctggaaaagaagggcattggacgcccgtccacctacgcgtccacg
atttccactatccaggaccgcggctacgtgaggaagcagggctctgccctggtccccagt
tggatcgcgttctcggtgatccgcctgctcgagcagcacttcaccgattatgtcgattac
gaattcacggccgacatggaaggtgacctggacaagattgccaacggccaggaggccggt
gcagcgtggttgcgccacttctactacggcgaggacgccgaccctggcttgctgagcatc
gtgaacaacctcggcgagattgatgcccgcgagatcaactccgtgccgatcgcagagggc
atcacgctccgcgtgggcaagttcggtccctaccttgaaagcagcatccccacggttgat
gagaagaccggcgaggtggtcgagtcggcacgtgccaacgtccccgaggaactggcaccc
gatgaactgacggccgccaaggctattgagctcatggaaactgcggccccggaggaacgc
gtcctcggcaccgatccgcacacgggccacaccattgtggccaagaacggccgctacggc
gcctacgtcaccgagatcatccccgagatgaccgaggaacaactggctgcgcagccggtg
gagtactacaagaacggcaagcccaaaccccccaagaagcccgtcaaggcaaagccgcgc
acgggttccctcttcaagtccatgtccgtggacaccgtgaccctggacgaagccctgcag
ttgatgagcctgccccgggttctgggcgaagacgccgagggcacaccgatcaccgtccag
aacggccgcttcggtccgtacctgaagaagggcacggactcccggtccatcgggtcggag
gaggaaatcttcaccatcaccctggaccaggccttggagatctactcacagcccaagcag
cgcggtgcccgtgccgccgttccgccgttggctgagttcggaccggatcccgtctccgag
aagaacatcgtggtcaaggagggccgcttcggtccgtacatcaccgacggcatcaccaac
atcacggtcccgcgctcgacgtcactggaggaactcacccgggaacgcgccgtcgagctt
cttgccgagaagcgggccaagggaccggtgaagcggaccaccacgcggaaggcgcctgcc
aggaaggccgctgccaagaagtag
DBGET
integrated database retrieval system
