Pantoea sp. SOD02: NR302_00365
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Entry
NR302_00365 CDS
T10895
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
panz03012
]
NR302_00365 (selB)
Translation factors [BR:
panz03012
]
Eukaryotic type
Elongation factors
NR302_00365 (selB)
Prokaryotic type
NR302_00365 (selB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB_bact
WHD_3rd_SelB
WHD_1st_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
FeoB_N
SRPRB
GTP_EFTU_D4
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UVC29473
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Position
complement(75002..76855)
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AA seq
617 aa
AA seq
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MIIATAGHVDHGKTALLQALTGVDADRLPEEKRRGMTIDLGYAYWPQQDGRVLGFIDVPG
HEKFLANMLAGIGGIHHALLVVACDDGVMPQTREHLQLLSLAGQPPLSVALTKADRVDEA
RIAAVQLQVAQLTQQLGWPAVPQFVTSSHTQQGIDALREHLSTLAEPAFDPRYRFRLAID
RAFTLKGTGLVVTGTALTGEVNVGDTLWLSSLNQPLRVRALHAQNQSVTRAQAGERIALN
IVGVVEKAQIARGDWLLSQAKAEGTTRLTVALRLLHPLKSASQPIHIHHAASHVTGRITL
LADDVAEIVLNEPLWLAENDRLIIRDSNAQHTLGGARVLLLNSKKRGKRQAEYLAWLQQL
ATAQHDDASLQAHLAYQPTELRDLAWARQLTDPALDALIENTAPVQLGNALMSAAQAALW
QQKLLESLAHFHQQHPEVPGIGHDRLRRVAMPHQPAEWVLALIDQLLAQGQLQQRQGWLH
LPDFEPRFNPQEEALWQQVGPLFGDQPLWVRDIALALQQDEQAIRSLLLTAARLGHITAI
VRDRYYRSDQIQIFADLIRQRAAQDGSTSAADFRNQLGTGRKVAIQILEFFDRSGFTRRR
GNDHLLRDARLFPASSE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgattattgccaccgctggacacgtcgatcacggcaaaaccgcgctgctacaggcatta
accggcgttgatgccgatcgcctgccggaagagaaacggcgcggcatgaccatcgatctc
ggctacgcatactggccgcagcaggacgggcgcgtgctcggctttattgatgtgccgggc
cacgagaaatttctcgccaatatgctggcaggcattggcggtattcatcatgcgctgctg
gtggtggcctgcgacgatggcgtaatgccgcaaacccgtgaacatctgcagctgctgagt
ttggccggacagccgccgctcagcgtggcgctgaccaaagccgatcgcgtggatgaggcg
cgcatcgcggcagtccagctacaggtggcgcaactcacgcagcaactcggctggccggca
gtgccgcaatttgtcaccagcagccacacgcagcaaggcatcgacgcgctgcgagagcat
ctcagcacgctggcggaaccggccttcgacccgcgttaccgttttcgtctcgccatcgat
cgcgccttcacgctgaaaggtactggattggtggtcaccggcaccgcgctgacgggtgaa
gtgaacgtcggtgataccctttggctcagcagcctgaatcagccgctgcgcgtgcgtgcg
ctgcatgcgcagaaccaatcggtgacgcgcgcgcaggccggtgagcgtatcgcattaaat
atcgttggcgttgtggaaaaagcgcagatcgcgcgcggcgactggctgctgtcacaggca
aaagcggaaggcaccacgcgcttaaccgtggcgctgcgcttgctgcacccgctgaaaagc
gcatcgcagccgattcatatccaccacgccgccagccacgtcaccggacgcatcacgctg
ctggcggatgatgtcgcggaaatagtcctgaacgaaccgctgtggctggcggagaacgat
cggctgattatccgcgacagcaatgcacaacacacgctcggcggcgcgcgcgtgctgctg
ctcaacagtaaaaagcgcggaaaacgtcaggcggagtatcttgcctggttgcagcagttg
gccaccgcacaacatgatgacgccagcctgcaggcgcatctggcgtatcaaccgacagaa
ttgcgtgatctggcgtgggcgcgccagcttaccgatcccgcactggatgcactgattgag
aacacagcgccggtgcagctcggtaacgcgctgatgagtgctgcgcaggcggcactttgg
cagcaaaagctattggaatcgctcgcgcattttcatcagcaacatccggaagtgccgggc
atcggccatgaccgtttgcgtcgcgtggcaatgccgcatcagcctgccgaatgggtgcta
gcgctgattgatcagctgctggcgcaaggccagctgcaacagcgtcaaggctggctgcat
ctgcccgatttcgaaccacgctttaatccgcaggaagaagcactttggcagcaggtcggc
ccgctgtttggcgaccagccgctgtgggtgcgcgatatcgcgctggcgctgcagcaggat
gaacaggcgattcgctcgctgctgcttactgccgcacggctcggacacatcaccgcgatc
gtgcgcgatcgctactatcgcagcgaccagatccagatcttcgccgatctgattcgccaa
cgcgccgcgcaagatggcagcaccagcgccgccgacttccgcaaccagctgggcaccggg
cgcaaagtggcgatacagattctggaattcttcgaccgcagcggcttcacccgccgccgt
ggtaacgatcatctgctgcgtgacgcacgcctgtttcccgcctcatctgaataa
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