Pantoea sp. SOD02: NR302_00680
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Entry
NR302_00680 CDS
T10895
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NR302_00680 (hmsP)
Enzymes [BR:
panz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NR302_00680 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
UVC31225
LinkDB
All DBs
Position
152629..154641
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AA seq
670 aa
AA seq
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MRVSRSLTIKQMATVSAVAMVTICIFIVIQLFHFVQQRRIDYAQQMENVAHTVRQPLSEA
VLKADIPQAERILNTLKPAGILSRADVVLPNAFQALHADFAPEKPVPRWVARLFELPVQI
TLPLYSVERSGLPKPIAYLVLQADSSRVYQFLLSTLSTMITTYLLLALILSIAISWCINR
LIVHPLRDISRDLQELPPQAILTHKMKLPHNHRDDEIGMLIRSYNRNQQVLESIHDEMSR
MTTHFAVTDLPNRALFLALLEQHMSHRHNRQAWGLMVIRIETLQEANGVLSDEQRDTLML
TLVEKIRSTVDDHSLLAQTGPSDFALLMKRAHNPFRAMRLARNLMIRINQPVNLQQLQLR
PNASIGLALHEENSISASEQLDRATSAMMSARHQGKNQILFFDPALTERAQKRLTQEHDI
LQGLQDEQFALYLQPQINMETGELAGAEALLRMRMPDGSYGLSEEFIASAEEIGVISAIG
RWVFEEACRILAGWQKQGINIPLSVNISAVQLRDASMVSHLQGLLERHRIAPGNFVLEIT
ETAQIGDAEQAIALLRLLQQTGVAVALDDFGMGYSNLNYLHQFKALPVNKLKMDRSFVAA
LPDDDTMVRIVAAIADIIHLDVIAEGVETAEQRDWLLARGITIGQGYLYAEALPLHVFNQ
RWLNSPQLPE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagtcgttctctaacgataaagcagatggcgacggtttccgccgtggcgatg
gtgaccatctgcatctttattgtcatccagctctttcactttgtgcagcagcgcaggatt
gactacgcccagcaaatggaaaatgtggcgcacaccgtgcgtcagccgctctccgaagca
gtactcaaagccgatattccgcaagcggaacgtatcctcaataccctaaaaccggccggt
attttatcgcgcgccgatgtggtgttgccgaatgccttccaggcgctgcacgccgatttc
gcgccggaaaaaccggtgccgcgctgggtcgcgcgcctgtttgaactgccggtgcaaatc
acgctgccgctctattcggtcgagcgatcgggcttgccgaagccgattgcctatctggtg
ttgcaggccgactcctcgcgcgtttatcagttcctgctcagcaccttgtcgaccatgatc
accacttatctgctgctggcgttgatcctctcgatcgccatcagctggtgtatcaatcgc
ttgattgtgcatccgctgcgcgacatttcgcgtgatttgcaggagctgccgccgcaggcg
attctgactcataaaatgaagctgccgcataaccatcgtgatgatgaaatcggcatgctg
atccgcagctacaaccgcaatcagcaggtgctggagtcgattcacgacgaaatgagtcgc
atgactacccatttcgccgtgacggatctgcccaatcgcgcgctgttcctcgcactgctc
gaacagcacatgagccatcgccacaatcgtcaggcgtggggcttgatggtgattcgcatt
gaaacgctgcaggaagccaacggcgtactgagcgatgagcagcgcgatacgttgatgctg
acgctggtggagaagattcgcagcaccgtcgacgatcactcgctgctggcgcaaaccggc
cccagcgacttcgccttgctgatgaagcgcgcgcacaatccgttccgcgccatgcgttta
gcgcgcaacctgatgattcgcatcaatcagccggtgaacctgcaacagctgcagctgcgt
ccgaatgccagcattggtctggcgctgcacgaagagaacagcatttcggccagcgaacag
ctcgatcgcgccacctcggcgatgatgtcggcgcgtcatcagggcaaaaaccagattctg
ttcttcgacccagcgctcaccgagcgggcgcaaaagcgtttaacgcaggagcacgacatc
ttgcaaggtttacaggacgagcagttcgccctctatctgcagccgcaaatcaatatggaa
accggcgagctggccggtgccgaagcgctgttgcgcatgcgcatgccggatggcagctac
ggattgtcagaagagtttattgccagcgccgaagagattggtgtgatttcggccattggt
cgctgggtgtttgaggaagcctgccgcattctggccggctggcagaagcagggcattaat
atcccgctcagcgtcaatatctcggcggtgcagctgcgtgatgccagcatggtcagccat
ttgcagggcttgctggagcgccatcgcattgcgccgggcaacttcgtactggaaatcacc
gaaaccgcgcagattggcgatgccgagcaggcgattgcgctgctgcgtttgctgcagcaa
accggggtggcagtggcgctcgacgatttcggtatgggctactccaacctcaactatctg
catcagttcaaagcgctgccagtgaataagctgaaaatggatcgcagcttcgtcgccgcg
ctgccggatgacgacaccatggtgcgcatcgtggcggcgattgccgacatcattcacctc
gacgtcatcgccgaaggtgtggaaaccgccgagcagcgcgactggctgctggcgcgcgga
attactatagggcaaggctacttatacgctgaagcgctgccgctccacgtctttaatcaa
cgctggctcaatagcccgcaactccctgaataa
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