Pantoea sp. SOD02: NR302_00845
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Entry
NR302_00845 CDS
T10895
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00300
Lysine biosynthesis
panz00470
D-Amino acid metabolism
panz01100
Metabolic pathways
panz01110
Biosynthesis of secondary metabolites
panz01120
Microbial metabolism in diverse environments
panz01230
Biosynthesis of amino acids
Module
panz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NR302_00845 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NR302_00845 (dapF)
Enzymes [BR:
panz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NR302_00845 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UVC29563
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Position
190131..190955
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRNLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKSDIRVSTQTGRMVLSVTNDELVRVNMGQ
PNFEPQSVPLRANKAENLYLQRVADQTVMFGAVSMGNPHCVIQVESVKTAPVETLGPELE
SHERFPERVNVGFMEVVNREHIRLRVYERGAGETQACGSGACAAVACGVQQGILAENVRV
DLPGGTLHIAWKGEGQPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcaaaaatgcacggtctcggcaacgactttatggtcgtggatgctgtgacg
caaaacgtctttttttcgccggaactgattcgccgcctggcggacagaaatctggggatc
ggttttgatcagctgctgatcgtcgaaccgccttacgatccggatctcgatttccattac
cgcattttcaacgccgatggcagtgaagtcgcgcagtgcggcaacggcgctcgctgtttc
gcccgctttgtgcgtctgaaagggttgaccaacaaaagcgacattcgcgtcagtacacaa
accggccgcatggtgctcagcgttaccaatgatgagctggtgcgcgtcaatatgggacaa
ccgaacttcgaaccgcaaagcgtgccgctgcgtgccaataaagcagagaacctttatttg
cagcgtgttgccgatcaaaccgtgatgtttggtgcggtatcgatgggcaatccgcactgc
gtgattcaggtagaaagcgtgaaaaccgcgccggtggaaacgctcggtccagagctggaa
agccacgagcgtttcccggagcgcgttaacgtcggtttcatggaagtggtcaatcgtgaa
cacatccgtctgcgcgtgtacgaacgtggcgcgggcgaaacccaggcttgcggcagcggc
gcttgtgcggcggtggcctgcggcgttcagcagggcattttagcggagaatgtccgcgtc
gatttgccgggcggaacgctgcatattgcctggaaaggggaagggcaaccgctgtttatg
accggtcctgccacacacgtctacgatgggtttattcatctatga
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