Pantoea sp. SOD02: NR302_00895
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Entry
NR302_00895 CDS
T10895
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
panz Pantoea sp. SOD02
Pathway
panz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NR302_00895 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panz03019
]
NR302_00895 (recQ)
03400 DNA repair and recombination proteins [BR:
panz03400
]
NR302_00895 (recQ)
Enzymes [BR:
panz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NR302_00895 (recQ)
Messenger RNA biogenesis [BR:
panz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NR302_00895 (recQ)
DNA repair and recombination proteins [BR:
panz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NR302_00895 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UVC29573
LinkDB
All DBs
Position
200385..202211
Genome browser
AA seq
608 aa
AA seq
DB search
MATSAVLNQEMLAQQVLQDTFGYQQFRPGQQNIIETALSGRDCLVVMPTGGGKSLCYQIP
ALVREGLTLVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQQQVFADCRTGKLKLLY
IAPERLMMDNFLDSLHQWNPVMLAVDEAHCISQWGHDFRPEYGSIGQLRQHFPDLPVMAL
TATADETTRNDIAHLLQMDDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGIDSAQRASVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKVPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQQQCDNCDICLDPPRRYDGLLEAQKAL
SSIYRTGQRFGMGYIVEVLRGASNQRIRDNGHDKLPVYGLGREHSHEHWISVLRQLIHLG
MVTQNIAMHSALQLTEAARPVLRAEVPLMLAVPRIVTVKTRGSSSPKVHSGNYDRQLFAK
LRKLRKAIADEENIPPYVVFNDATLIEMAEQMPISASEMLSVNGVGHRKLERFGKPFLVM
IKEHVDEG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacatcggcagtgcttaatcaggaaatgctggcgcagcaggtattacaagatacc
ttcggctatcagcagttccgcccaggtcagcaaaacatcatcgaaaccgccctgtcagga
cgcgattgtctggtggtgatgccgaccggcggcggcaaatcgctgtgctatcaaatcccg
gcgctggtgcgcgaagggctgacgctggtggtttcaccgctgatttcactgatgaaagat
caggtcgatcagctgctggctaacggcgtggcagcagcgtgcctcaactcaacgcagacg
cgtgagcagcagcagcaggtgtttgcggattgtcgtactggcaaactcaagctgctgtat
atcgcgcctgaacgcctgatgatggacaacttcctcgacagcctgcaccagtggaatccg
gtgatgctggcggtggatgaagcgcactgtatttcacagtggggccacgatttccgtccg
gaatatggctcgattggccagctgcgtcagcacttccctgatttgccggtcatggcgtta
accgccaccgccgatgaaaccacgcgtaacgatatcgcccatctgctgcagatggacgat
ccgctgattcaaatcagcagctttgaccgcccgaatattcgctacacgctggtggagaaa
ttcaaacccaccgagcaacttctgcgttacgtgcaggatcagcgcggcaaaagcggcatt
atttactgtaacagccgcgcgaaagtggaagacaccgccgcgcgcctgcagagccgtggc
ttgagcgttggcgcttatcacgccggtatcgatagcgcgcagcgtgccagcgtgcaggaa
gccttccagcgtgacgatctgcaaattgtggtcgccaccgtggcattcggtatgggcatc
aataaacccaacgtgcgctttgtggtgcacttcgatattccgcgcaacatcgaatcctat
tatcaggaaaccggtcgcgccgggcgtgatggtctgcctgccgaagcgatgatgctttac
gacccggccgatatggcgtggctgcgtaaatgtctggaagagaaagtgcccggaccgttg
caggacattgaacgccacaagctcaacgcgatgggcgcgtttgctgaagcgcaaacctgt
cgtcgtctggtactgctgaactatttcggcgaaggtcgccagcagcagtgcgacaactgc
gatatctgcctcgatccgccacgtcgctacgacggcttgctggaggcgcaaaaggcgctg
tcgagcatctatcgtaccggccaacgctttgggatgggctatattgttgaggttttgcgc
ggagccagtaatcagcgtattcgtgacaacggccacgacaaactgccggtgtacggctta
ggccgcgagcacagccacgaacactggatcagcgtgctgcgtcagctgattcacctcggc
atggtgacgcaaaacatcgccatgcattcggcgctgcaactgaccgaagcggcgcgcccg
gtgttacgcgcggaagtaccgctgatgttggcggtgccgcgtatcgtgacggtgaagacg
cgtggcagcagttcgccgaaagtacacagcggcaattacgatcgccagctgtttgccaag
ctgcgtaagctgcgcaaagcgattgccgatgaagagaatattccgccgtacgtggtgttt
aacgatgccacgctgattgaaatggcagaacaaatgccgattagcgcgtcagaaatgctc
agcgtgaacggcgtcggtcatcgcaaactggagcgttttggtaagccgttcctggtgatg
atcaaagaacatgttgatgaaggttaa
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