Pantoea sp. SOD02: NR302_01020
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Entry
NR302_01020 CDS
T10895
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00071
Fatty acid degradation
panz00280
Valine, leucine and isoleucine degradation
panz00310
Lysine degradation
panz00362
Benzoate degradation
panz00380
Tryptophan metabolism
panz00410
beta-Alanine metabolism
panz00640
Propanoate metabolism
panz00650
Butanoate metabolism
panz00907
Pinene, camphor and geraniol degradation
panz00930
Caprolactam degradation
panz01100
Metabolic pathways
panz01110
Biosynthesis of secondary metabolites
panz01120
Microbial metabolism in diverse environments
panz01200
Carbon metabolism
panz01212
Fatty acid metabolism
Module
panz_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NR302_01020 (fadB)
00650 Butanoate metabolism
NR302_01020 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NR302_01020 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NR302_01020 (fadB)
00310 Lysine degradation
NR302_01020 (fadB)
00380 Tryptophan metabolism
NR302_01020 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NR302_01020 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NR302_01020 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NR302_01020 (fadB)
00930 Caprolactam degradation
NR302_01020 (fadB)
Enzymes [BR:
panz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NR302_01020 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NR302_01020 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NR302_01020 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NR302_01020 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UVC29598
LinkDB
All DBs
Position
complement(226103..228286)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGDTLSVHWLDDGIAELVFDAPGSVNKLDTKTVASLGEALSVLEQQTALRGLLLSSA
KPAFIVGADITEFLSLFDAPEEKLSQWLAFANSIFNRLEDLPVPTVAAIDGYALGGGCEC
ILATDFRVATPTARIGLPETKLGIMPGFGGSVRLPRLLGADSAMEIIAAGKDVDGNSALK
LGLVDAVVSSDKLRDAALTVLQDAIVQGNWQARRAPKLAPLKLSPIEAAMSFTIAKSMVL
QTAGKHYPAPITAVKTIEAAASLGRDDALKLETAAFVPLAQSDVARALVGIFLNDQYVKG
LAKKHSSAAGAPQQAAVLGAGIMGGGIAYQSAWKGVPVMMKDINPQALTLGMTEASKLLN
KQLERGKIDGAKLASVLTTIQPTLDYAGFERTDVVVEAVVENPQIKAKVLAETEQHLRED
AILASNTSTIPISQLAQALKRPENFCGMHFFNPVPRMPLVEVIRGEKTSEATLSKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQVDKVMEKQFGWPMGPAWLL
DVVGIDTAHHAQQVMAQGFPSRMQKDYRDAIDVLFEAKRYGQKNGLGFYRWELDKKGKAQ
KKADAAVDALLEPICQPTRVFSDDEIANRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYMDTLGNSNVVDQAKRYTALGPLYALPELLLQKAHQHQSWYPAVQPID
EAALQSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgataccctttcagttcactggcttgacgacggcatcgccgagctg
gttttcgatgcgcccggttcggtgaacaaactcgataccaaaactgttgcctcattgggc
gaggcattaagcgtattggaacagcaaaccgcgctgcgcggcctgttgctctcgtcggcc
aaaccggcatttatcgtcggtgccgacatcacagaattcctgtcgctgtttgatgcgcca
gaagagaagctgagtcagtggttggcatttgccaacagcatcttcaatcgcttagaagat
ttgccggtgccaaccgtggccgctatcgacggctatgcgctgggtggcggctgtgaatgc
atactggcgaccgacttccgcgttgccacgcccaccgcacgcatcggcctgccggaaacc
aaactgggcatcatgccgggctttggcggcagcgtgcgtttgccgcgcctgctcggtgcc
gatagcgcgatggaaatcatcgccgccggtaaagatgttgatggcaacagcgccctgaaa
ctcggtttggtggatgcagtggtcagcagcgacaaactacgtgatgcggcactcaccgta
ttgcaggacgccattgtgcagggcaactggcaggcacgccgcgcgccgaagctggcgccg
ctgaaactcagcccgattgaagccgccatgagcttcaccatcgccaaaagcatggtgctg
caaaccgcaggtaaacactatccggcaccgattactgccgtgaaaaccattgaagccgcc
gccagcctcggacgtgatgatgcgctgaagctggaaaccgccgcttttgtaccgctggcg
cagagcgatgtggcgcgtgcgctggtcggcatcttcctgaacgatcagtacgtcaaaggc
ctggcgaagaagcacagcagcgcggccggtgcgccgcagcaagccgcagtattgggcgca
gggattatgggcggcggcattgcttatcaatcggcatggaaaggcgtgccggtgatgatg
aaagatatcaatccgcaggcgttaacgctgggcatgaccgaagccagcaagctgctgaac
aaacagctggagcgcggcaaaattgacggtgcgaaactggcgagcgtactcaccactatt
cagcccacgttggattatgccggattcgaacgtaccgacgtggtggtagaagcggtagtg
gaaaatccgcagatcaaagccaaagtgctggcagaaaccgagcagcatctgcgcgaggac
gccattctcgcctccaacacttcaaccattccgatcagccagctggcgcaagccttaaaa
cgcccggaaaacttctgcggcatgcacttcttcaatccggtgccgcgtatgccgctggtc
gaagtgattcgcggtgagaaaacttcagaagcgactctcagcaaagtggtggcctgggcg
agcaaaatgggcaagacgccgattgtggtgaatgactgtcccggcttctttgtgaatcgc
gtgctgttcccctacttcgccgctttcagcctgctgctgcgcgatggcgcagatttccgt
caggtcgataaagtgatggaaaaacagttcggctggccgatgggcccagcgtggctgctg
gatgtggtcggcattgataccgcgcaccatgctcaacaagtgatggcgcaaggtttcccg
tctcgcatgcagaaagattaccgcgatgcgatcgacgtactgttcgaagccaaacgttac
ggccagaaaaacggtctgggcttttaccgctgggagctggataaaaaaggcaaggcgcag
aagaaggccgatgcagctgtcgatgcgttgctggaacctatttgccagccgacgcgcgtg
ttcagcgatgacgagatcgccaaccgcatgatgctgccgatgctcaacgaagtggtgcgc
tgcctcgaagagaagatcatcgcttcaccggccgaagccgatatggcgctggtgtacggt
ttaggcttcccaccgttccgtggcggcgcgttccgctacatggatacgctgggcaacagc
aacgtggtcgatcaggccaaacgttataccgcgctcggcccgctttacgcgctgccggag
ctgctgttgcaaaaagcccatcagcatcagagctggtatcccgcggtgcaaccgattgac
gaagcggcgctgcaaagtgcctga
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