KEGG   Pantoea sp. SOD02: NR302_01145
Entry
NR302_01145       CDS       T10895                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
panz  Pantoea sp. SOD02
Pathway
panz03020  RNA polymerase
Brite
Enzymes [BR:panz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NR302_01145 (rpoC)
Transcription machinery [BR:panz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NR302_01145 (rpoC)
DNA repair and recombination proteins [BR:panz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NR302_01145 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: UVC29615
LinkDB
Position
252119..256342
AA seq 1407 aa
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLEKRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDKVNAKGEGMVLTGPKEAERVYRAG
LAELHARVKVRITEYTKNEQEEFVAKTSIIDTTIGRAILWMIVPKGLPYSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKAEIVAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVSKAMMDNLQTETVINRHGEEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTFEGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVLKPGTADILIPRNTLIDEHWCDVIELNSVDAIKVRSVVGCETDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTIKL
TNAKSVTNSSGKLVIVSRNVELKMIDEFGRTKESYKVPYGAVMAKGDGEQVAAGETVANW
DPHTMPVITEVGGFIRFTDMIDGQTITRQTDDLTGLSSLVVLDSAERTAGGKDLRPALKI
VDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGVKISAGDTLSRVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKATISSVGSTDFLEGEQAEYSRIKISNRELEANGKIGATFMRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRSAGEAPV
APQVTADEASASLAELLNAGLGGSDDE
NT seq 4224 nt   +upstreamnt  +downstreamnt
gtgaaagacttacttaagtttctgaaagcgcaaactaagaccgaagagtttgatgcgatc
aaaattgctctggcctcgccagacatgatccgttcatggtcttttggtgaagttaaaaag
ccggaaaccattaactaccgtaccttcaagcctgagcgtgacggtcttttctgtgcccgt
attttcggaccggtaaaagattacgaatgcctgtgcggtaagtacaagcgtttaaaacat
cgcggcgtgatctgtgagaagtgtggcgttgaagttacacagaccaaagtacgtcgtgag
cgcatgggccacattgagctggcttctccaaccgcgcacatttggttcctgaaatcactg
ccttcgcgtatcggcttgctgctggatatgccactgcgtgatatcgagcgcgtgctgtac
ttcgaatcttatgtggttatcgaaggcggcatgaccaacctggaaaaacgtcagattctg
acggaagagcagtaccttgacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctattcaggcgctgctgaaaaatatggatctggagcaagagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgagaccaaacgtaaaaagctgaccaagcgt
atcaagctgctggaagcgttcgttcagtctggtaacaagccagagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccgctggtaccgctggatggtggtcgtttc
gctacgtcggatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgcctgctggatctggctgcgccagatatcatcgtacgtaacgaaaaacgtatgctgcag
gaagcggttgatgcactgctggataacggccgtcgcggtcgcgccatcactggctcgaac
aagcgtccgctgaaatctctggcagacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgttgggtaaacgtgttgactactctggccgttcagttatcaccgttggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggctcttgagctgttcaaaccgttc
atttacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaaaatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg
gtactgctgaaccgtgcaccaactctgcaccgtttgggtatccaggcgtttgaaccggtt
ctgatcgaaggtaaagcgatccagctgcacccgctggtttgtgcggcatataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtcgaccaacaacattctgtcaccagcgaacggcgagccaatcatc
gttccttcacaggacgttgtactgggtctgtactacatgacccgcgacaaagtgaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtgtttaccgcgctggc
ctggccgagctgcatgcacgcgttaaagtgcgtatcaccgaatatacaaagaacgagcag
gaagagttcgttgcgaaaaccagcattatcgacaccaccattggtcgtgcgattctgtgg
atgatcgttccgaagggcctgccttactccatcgtcaaccaggcgctgggtaagaaagca
atttccaagatgctgaacacctgttaccgcatcctgggcctgaagccgaccgttatcttt
gctgaccaaaccatgtacaccggttttgcttacgcagcccgttcaggtgcctctgtaggt
atcgacgacatggtcatcccagccaagaaagcggaaatcgtagcggaagcggaagcggaa
gttgctgagattcaggaacagttccagtctggtctggtaactgctggcgaacgttacaac
aaagttatcgatatttgggccgccgctaacgaacgcgtttccaaagcgatgatggataac
ctgcaaactgaaaccgtgatcaaccgtcatggcgaagaagaacagcaggtttcgttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgctgcacagattcgtcagctg
gccggtatgcgtggtctgatggctaagccagacggctcaatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtcttgcggataccgcactgaaaacagctaactccggttatctgacgcgtcgtctg
gtagacgtagcgcaggatctggttgttaccgaagatgactgcggcacgttcgaaggcatc
atgatgactccggttatcgaaggtggcgacgttaaagagccgcttcgtgagcgtgtactg
ggtcgtgtaacggctgaagacgttctgaagccgggcactgcagacatcctgatcccgcgt
aacaccctgatcgatgagcactggtgtgatgtgatcgaactgaactcagtcgatgcgatc
aaagtgcgctcggttgttggctgtgaaaccgacttcggtgtgtgtgcacactgctacggt
cgcgatctggcacgtggtcacatcatcaataaaggtgaggccatcggtgttatcgcagca
caatccatcggtgagccgggtactcagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaagaacaaaggtactatcaagctg
accaacgcgaagtctgtaaccaactcctcagggaaactggttatcgtttcacgtaacgtc
gagctgaagatgatcgacgagttcggtcgtaccaaagagagctataaagtgccttacggt
gcggttatggctaaaggtgatggcgagcaggttgcagcgggcgagaccgtagcaaactgg
gatccgcataccatgccggtaatcaccgaagtgggcggtttcattcgcttcactgacatg
atcgacggtcagaccattacgcgtcagactgacgacttaaccggtctgtcatcgctggtg
gttctggattctgcagaacgtactgcgggtggtaaagatctgcgtcctgcgctgaaaatt
gttgatgccaacggaaatgatgttctgattccaggtaccgacatgccagcacagtacttc
ctgccgggcaaagcgattgttcagctggaagatggcgttaagatcagtgccggtgacact
ctgtcgcgtgttccgcaagaatctggcggtaccaaggatattaccggtggtctgccgcgc
gttgctgacttgttcgaagcgcgtcgtccgaaagagccagcaatcctggcggagatcagc
ggtatcatctccttcggtaaagagaccaaaggtaagcgtcgtctggtaatcacgccggtt
gatggtagcgatccgtacgaagagatgattccaaaatggcgtcagcttaacgtattcgaa
ggtgagcgcgtagaacgtggtgacgtcgtatctgacggcccagagtctccgcacgatatc
ctgcgtctgcgtggcgtccatgctgtgacccgttacatcactaacgaagtgcaggaagtt
taccgtctgcaaggcgttaagattaacgataaacacatcgaagtcatcgttcgtcagatg
ctgcgtaaagcaaccatctcgagcgtgggaagcaccgacttcctggaaggtgagcaggct
gaatactctcgcatcaagatctctaaccgtgaacttgaagcgaatggcaaaatcggcgca
acattcatgcgcgatctgctgggtatcaccaaagcgtcactggcaaccgaatcgttcatc
tctgcagcatcgttccaggagaccacgcgtgtcctgaccgaagcagcagttgcaggtaag
cgcgatgaactgcgcggcctgaaagagaacgtaatcgtgggtcgtctgatcccagccggt
accggttatgcttatcaccaggatcgtatgcgtcgccgctctgcgggcgaagcaccggtt
gcaccgcaggttactgcggatgaagcctctgctagcctggctgaattgctgaacgctggt
ctgggcggaagcgacgacgagtaa

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