Pantoea sp. SOD02: NR302_01785
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Entry
NR302_01785 CDS
T10895
Name
(GenBank) Ig-like domain-containing protein
KO
K20276
large repetitive protein
Organism
panz Pantoea sp. SOD02
Pathway
panz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NR302_01785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
CarboxypepD_reg
SdrD_B
Glucodextran_B
Motif
Other DBs
NCBI-ProteinID:
UVC29736
LinkDB
All DBs
Position
complement(402404..406978)
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AA seq
1524 aa
AA seq
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MSTTKNQNATRTAQTSANTASIATAAAQLPPIVPIKYNEAIIDTIRTPQNNKLIPIESGG
DAEKGVLIFEGRATANKQIIIFDNGVEIARINATPTGKWVWSSDAFTSGEHHFTVQVAGA
GNPVSASYDVSVATQPEQPVLVAQAIDDSAGYAQYLQSGSTTNDTTPRFTGSATPNSVVK
IFDGEKEIGSVQANGNGQWSFTAKLDGGAHSLTFVSGKTSSEPYILNVVTPDAQQIEIYT
VVDDINRYGEIYLKSGDTTQDTTPRFSGKAGGNVIVRLFNGDQEIGSTLSSASGFWYLNP
TLPAGSYNLVFKAGEGSESKPFALNIVSADSQPIEIYTVVDDINRYGEIYLKSGDTTQDT
TPRFSGKAGANVIVRLFNGDQEIGSTLSSASGFWYLNPTLPAGSYNLVFKAGEGSESKPF
ALNIVSADSQPIEIFSVVDDLNRYSETYLKSGDSTQDTTPRFSGKAGANVIVRLFNGDQE
IGSTLASASGYWYLNLTLPAGSYNLVFKAGEGSDSKPFALNIVSADSQPIEITHVYDDSD
RYYHKPLKSGDSTQDTTPRFNGKAGANVLIRLFDGEKEVGSTYSDAYGNWSLTPTLPAGS
YNLVFKAGEGSVSKAFALNITSADSQPIEIYAALEDSNGYNRNLAPGATIKDTTPYFYGK
AGANVVIRLYNGEQEIGSTKSDAYGSWSLTPTLTSGSYNLMFKAGEGSATKPFPVTIVSA
AAEPIEVSGAFDNSAGYNQLIGSGATSIDTTPRFFGRAGANVVIRLYNGDEVLGSTVTDA
WGSWTLTPELSLGSYNLVFKTAEGTASAPFVITISAPEATKPQTPEIEYILDNVGKGGYV
EKNGTTDDDTPKLSGTAEPNSLVQIFDNGIKIGERRVSSTGYWEFTPVNPAYLVNGNHSF
VVKSSNGTETEAWNIVVNVPVDISFVGSNSGEETGDRETADTTPLITGYGPKGVLIRLYE
GDKEIGSVVTSVRDGSWIFNVTDPLSVGTHSIVAKVGNDNASAQFDFVITKPEPEVPVEP
EVPVEPEVPVEPEVPVEPEVPVEPEVPVEPEVPVEPEVPVEPENPFNITQVMDQFFGPGI
VKANGITDDNRPNLVGNAPANTLVRIYDNGIEIGSTLANSFGAWAFKPASDLSLGAHAIT
VGANANDTSEAFSFNVVAAQVVTPWVLGGISEFNGIDNFGYNASIDDNTPVLNGIAVAGT
LVTITIDGKVAGSVIANEYGRWSFQTTEPLAAGGHEVVATDVAGNKGGTLIFSLVAPENI
GINFNVYDDNAGEDLIAYGAVTKDSTPLLRGIAGQNIVLEIYDNGELVGSVRTAQDGTWS
YSLKLANGDHSISVQNENQDSLLARKFTVEADAASIDAVSGRFFDFDTRQPSDGEAIQDH
RVVIYGSGEPEAVVELLTTDGRSLGFTGVAASGKWYIEVETRFDDGQYSVFAKVNGVESE
PFVFHIGERPVAETKSEMFSLFDISGAELLSDAEDTLLGNNVEAEAQQVNLNLTQADLSV
VTTSGIATSTVAPIALQDEQYQAI
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccactaaaaaccaaaacgcaacacgtacagcgcaaaccagcgccaatactgct
tccatcgcaactgctgcggcgcaattaccaccgattgtgcctatcaagtataacgaagcg
atcatcgataccatccgcaccccacagaataacaaactgatcccgattgaatctggcggc
gatgcggaaaaaggcgtgttgattttcgaaggccgagctacagcgaacaagcaaattatc
atttttgataacggcgttgagattgcacgtatcaatgccacgccaaccggtaagtgggtt
tggtcgtctgatgcatttacctcgggcgaacaccactttaccgtgcaggttgctggcgcg
ggcaaccccgtttcagccagctatgatgtttcagtagctactcagccagaacagcctgtt
ctggtggcgcaagccattgacgacagtgcgggctacgcccaatacctgcagtctggcagc
actaccaatgacaccacgccacgtttcaccggcagcgccacgccaaactccgtcgtcaaa
atctttgatggtgagaaggaaatcggctcggtgcaagctaatggtaatggccagtggagc
tttactgccaagctggacggcggtgcgcatagcctgacctttgtatcgggtaaaacgtca
agcgagccttatatcctgaacgttgtgacgcctgacgctcagcagatagaaatttatacc
gttgttgatgacatcaatcgttacggtgaaatctatcttaaatccggggacactacgcag
gacaccacgccacgtttcagcggcaaagccggtggcaacgtcatcgttcgcctgtttaat
ggcgatcaggaaattgggtctaccctttcctcggcaagcggcttctggtatctgaaccct
actctgcctgcaggcagctacaacctggtattcaaggccggtgaagggtcagagagcaag
ccgttcgcgctgaacatcgtttctgccgattcgcagccaatcgaaatttataccgtcgtt
gatgacattaatcgttacggtgaaatctatcttaaatccggggacaccacgcaggacact
acgccacgtttcagcggcaaagccggtgcgaatgttatcgttcgcctgtttaatggtgac
caggaaattggctctaccctttcctcggcaagcggcttctggtatctgaaccctactctg
ccggcaggcagctacaacctggtgttcaaggccggtgaaggttcagagagcaaaccgttc
gcgctgaacatcgtttctgccgattcgcagccaattgaaattttcagtgttgttgatgac
cttaatcggtatagcgaaacctatctcaaatctggtgactccacccaggacaccacgcca
cgcttcagcggcaaagccggtgctaacgtcatcgttcgcctgtttaacggcgatcaggaa
attggatcgaccctggcctcggcaagcggctactggtatctgaaccttactctgccggca
ggcagctacaacctggtgttcaaggccggtgaaggttcagacagcaaaccgtttgcgctg
aacatcgtttctgccgattcgcagccaattgaaatcacccatgtctatgatgacagcgat
cgctactaccacaagccgctcaagtctggcgatagcacgcaagacaccaccccacgcttt
aacggtaaagccggtgcaaatgtactgatccgcctgttcgacggcgagaaagaggtaggt
tcaacttactcagatgcttacggtaactggagcctgacaccaacgttgccagcaggtagc
tacaatctggtgttcaaagccggtgaaggttcagtgagcaaagcgttcgcgctgaacatc
acctcggccgattcgcagccgattgaaatttatgccgcgttagaagactcaaacggctat
aaccgcaacctggcgccaggcgccaccatcaaagacaccacgccttacttctatggcaaa
gccggtgctaacgtggtgattcgcctgtataacggcgagcaagaaattggatcaacgaaa
tctgacgcttacggcagctggagcctgacaccaacgctgacttcaggtagctacaatctg
atgttcaaagcgggcgaaggctctgccaccaaaccattcccggtgaccattgtttctgca
gcagcagaaccaattgaagtgtcgggtgcgtttgataactcagctggctacaaccaactg
attggttcaggtgcaacatcaatcgatactacgccacgcttctttggtcgtgcaggcgct
aacgttgttattcgtttgtacaacggcgacgaggttctgggctcaaccgtgaccgatgcg
tggggcagctggactctgacgccggagctgtcgctgggtagctacaatctggtgttcaaa
accgccgaaggcaccgccagtgcgccgttcgttatcaccatttctgcgccagaagccacc
aagccacaaacaccagagatcgagtacatcctcgataacgttggcaagggcggctatgtt
gagaaaaatggcaccaccgatgacgacacaccgaaactgtcaggtactgcagagccaaat
agtctggtacaaattttcgacaatggtatcaaaatcggcgagcgccgcgtttcatccacc
ggttactgggaattcactccggttaacccagcgtatctggtcaacggcaaccacagcttt
gtggtgaaaagcagtaacggtacagaaactgaagcctggaatattgttgtaaacgttccg
gttgatatcagcttcgtaggcagcaactcaggtgaagagaccggcgatcgtgaaacggcg
gataccacgccactgatcacaggatacggccctaaaggtgtgttgattcgtctgtacgaa
ggtgacaaagagattggatccgtggtgaccagcgttcgtgatggcagctggattttcaac
gtaaccgatccactgtctgttggcactcacagcatcgtggcgaaagttggcaacgataac
gctagtgcgcaattcgactttgtgatcactaagccagagccagaagtaccggttgagcct
gaagtgcccgttgagcctgaagtgcccgttgagcctgaagtacccgttgagcctgaagta
ccagttgagcctgaagtaccagttgagcctgaagtgccagttgagcctgaagtacccgtt
gagcctgagaatccgttcaatattactcaggtaatggatcaattcttcggaccaggcatc
gtcaaagcgaacggtattacagatgacaaccgaccaaacctggtaggtaatgcacctgct
aatacgctggtccgtatctatgataacggtatcgaaatcggttctactttggcaaacagc
tttggtgcatgggcatttaaacccgcatcagatctctccttaggtgcgcatgccattact
gttggtgcaaatgctaatgataccagcgaagcattctcctttaatgttgtggcagcacag
gtcgttactccgtgggttctgggtgggatcagcgaattcaatggtatagataactttggc
tacaacgcttccatcgatgacaacacgccagtactaaatggcatagcggttgccggcacg
ctggtcaccatcaccatcgatggcaaagttgcaggcagcgttattgccaatgagtacggt
cgctggagcttccagaccactgaaccattagcggctggcggacacgaagtggttgccacc
gatgttgcgggcaacaaaggcggcacgctgatcttcagcctggttgcacctgaaaatatc
ggcatcaacttcaacgtttacgacgataacgcgggtgaagacctgattgcatacggtgcg
gtgacaaaagattcaacgccgctgctgcgtggcattgcgggtcagaatatcgtgctggaa
atctacgataacggcgagttggttggcagcgtgcgcaccgcgcaagatggcacctggtct
tactcactgaagctggctaatggtgatcacagcatttctgtccaaaatgaaaaccaggat
agcttgctggctcgcaagttcactgttgaagcggatgccgcgagtattgatgctgtttct
ggtcgattcttcgatttcgacactcgccagccttccgatggcgaagcgattcaggatcat
cgcgtagtgatttacggttcaggtgagccggaagcagtcgtggaactgctgacaacggat
ggccgttctctgggcttcaccggtgttgctgccagcggtaagtggtatatcgaagtggag
actcgctttgatgatggccaatacagcgtatttgccaaagttaacggcgtggaatccgag
ccattcgtcttccacattggcgagcgtccggttgctgaaacgaagagtgagatgttcagc
ctgttcgatatttcaggtgcagagctgctgagcgatgcggaagatacgctgctgggtaat
aacgttgaagcggaagcacagcaggttaacctgaatctgactcaggccgacctgtctgtt
gtcaccacttcaggtattgccaccagcaccgttgcaccgattgcattgcaggatgagcag
tatcaggcaatctaa
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