Pantoea sp. SOD02: NR302_01990
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Entry
NR302_01990 CDS
T10895
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
panz03000
]
NR302_01990
Transcription factors [BR:
panz03000
]
Prokaryotic type
Helix-turn-helix
Other families
NR302_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
GAF
Mg_chelatase
MCM
PAS_8
AAA_16
AAA
AAA_2
PAS
AAA_3
HTH_50
DUF1492
DAP3
HTH_30
nSTAND3
ATPase
AAA_7
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UVC29776
LinkDB
All DBs
Position
complement(456348..458300)
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AA seq
650 aa
AA seq
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MRASERLPFKDESDPIFSLPDSAEVGEWDTLLWQGWHSFERGEQPGWMRHSILQSWRRSQ
QRAIDPATFAYVSPPAAELAAILEHNAELILAARSIMENLLAYNPDGHINLTDAQGVTLH
FCGADLTPVGSILREEVLGTNCTARCLIEQRLVYVLSGENWKLDLRKRHRQCAAAPVRDA
SGQLLGVLTLTATPDNFNAHTLGTVQAAAEAVGQQLMLRRLLAEQQSILETLNEGVIVCD
RHGRIKTLNRYARQIFSGLDPNAGPIDVLLQPQGGSLLTMPFCNDRELQFMPDGVNPLSC
LISLMPAPDGGRVLSLRENQRIRAITRRVMGVGASYTFEMIRGHAPRVLQAIQKARASSR
SDSTVLLTGESGTGKELFAQAIHNASPRQQEAFIALNCGALPRDLVQSELFGYVDGAFTG
SRRGGSAGKFELADGGTLFLDEIGEMPLEAQTSLLRVLQEGEVVRIGAAHPIKVNVRIIA
ATHCNLLDAVEKGAFRRDLYYRLNVISLEIPPLRERQEDIPGLVNTFIQALCTRLKRIAP
QLSAEAMSCLQAWHWPGNVRELENLVERMVNLCEGLEIDRHDLPEEMVQRNAPVASELSS
LQENERQHVMQVVREQKGNLRQSAQLLGISRTALYNKLNQWQVDVAELRR
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccagtgagcgtttgccgtttaaagatgaaagcgatccgatcttcagcttgccg
gacagcgccgaggtgggcgaatgggacacgttgttgtggcagggctggcacagcttcgaa
cgcggcgaacagcccggctggatgcggcacagcattttgcagtcgtggcggcgatcacag
cagcgcgcgatcgatcccgccaccttcgcctatgtctcgccgcccgcagcggaactggcg
gcgatccttgagcacaacgccgagctgatcctcgcagcgcgcagcatcatggagaacctg
ctggcgtataacccggatggccacatcaatctgaccgatgcgcaaggcgtgacgctgcat
ttctgcggcgcggatctgacgccggtcggcagcatcctgcgcgaagaggtactcggcacc
aactgcaccgcacgctgcctgattgagcagcggctggtgtatgtattgagcggcgagaac
tggaagctggatctgcgcaaacgccatcgccaatgcgccgccgcgccggtgcgtgatgcc
agcggccagttgctgggcgtactcacattgaccgccacgcccgacaacttcaatgcgcac
acgctcggcacggtgcaggcggcagcggaagcggtcggtcagcaattgatgctgcgccgt
ttgctggccgagcagcagtcgatcctcgaaaccctgaacgaaggcgtgatcgtctgcgat
cgccacggccgcatcaaaacgctgaatcgctatgcccgccagatctttagcggcctcgat
cccaacgccgggccgatcgacgtgctgctgcaaccacaaggcggatcgctgctcaccatg
ccgttctgcaatgaccgcgagctgcaattcatgccagatggcgtgaatcccctttcctgc
ctgatttcgctgatgcccgcgcccgacggcggccgcgtgctgtcgctgcgcgagaaccag
cgtatccgcgccattacgcgccgcgtgatgggcgtgggcgccagttacacctttgagatg
attcgcgggcacgcaccgcgcgtgctgcaagcgattcagaaagcgcgcgccagcagccgc
agcgacagcaccgtgttattaaccggcgaaagcggcacaggcaaagagctgttcgcgcag
gcgattcacaacgccagcccgcgccagcaggaagcctttatcgcgctcaactgcggcgcg
ctgccgcgtgatttggtgcagagcgaactgtttggctatgtcgatggcgcttttaccgga
tcgcggcgcggcggctcagcgggcaaatttgagctggcggatggcggcaccttgttcctc
gatgagattggcgagatgccgctcgaggcgcaaaccagcctgctgcgtgtgctgcaggaa
ggcgaagtggtgagaatcggcgcggcgcatcccatcaaggttaacgtgcgtatcatcgcc
gccacccactgcaatctgctggatgcggtggagaaaggcgcgttccgccgcgatctctac
tatcgcctgaatgtaatttcgctagagattccgccgctgcgcgagcgtcaggaggatatt
cccggcctggtgaatacctttattcaggcgctctgcacccgattaaagcgcatcgcgccg
cagctctccgccgaggcaatgagctgtttacaggcgtggcactggcccggcaacgtgcgc
gagctggagaatctggtcgagcgcatggtgaatttgtgtgaagggctggagattgatcgc
cacgatctgccggaagagatggtgcagcgtaacgcgcctgtcgccagcgaattgagctcg
ctgcaggagaatgagcgccagcatgtgatgcaggtggtgcgcgagcagaaaggcaacctg
cgccagtccgcgcagctgctgggaatttcacgcaccgcgctgtataacaagctaaatcag
tggcaggtggatgtggcggaattgcgacgctga
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