Pantoea sp. SOD02: NR302_02620
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Entry
NR302_02620 CDS
T10895
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
panz Pantoea sp. SOD02
Pathway
panz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NR302_02620 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
panz03019
]
NR302_02620 (pnp)
03016 Transfer RNA biogenesis [BR:
panz03016
]
NR302_02620 (pnp)
Enzymes [BR:
panz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NR302_02620 (pnp)
Messenger RNA biogenesis [BR:
panz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NR302_02620 (pnp)
Transfer RNA biogenesis [BR:
panz03016
]
Prokaryotic type
tRNA degradation factors
NR302_02620 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
KH_SLS1_2
aRib
KH-I_KHDC4-BBP
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UVC29890
LinkDB
All DBs
Position
586762..588900
Genome browser
AA seq
712 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKTKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPVRPLFPEGFINEVQVIATVVSV
NPQVNPDIVAMIGASAALALSGLPFNGPIGAARVGYINDQYVLNPTADEINESRLNLVVA
GTQNAVLMVESEADILTEEQMLGAVVYGHDQQQIVIENINALVAEAGKPRWDWQPLPTND
ALIARVTALAEAGISDAYRITDKQERYTQVGAVKDATIAALQAEDETLDAGDIADIVHDL
EKSVVRSRIIRGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTAR
DAQNLDELMGERTDSFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKQAD
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEADNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILSVMEQA
ISTPRQEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DSLKAKEAIRRIEEITAEIEVGRIYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATEQKPAEEVATAASDASDAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaacccgatcgtacgcaaattccaatatggtcagcataccgtcacgctggaaacc
ggcatgatggcgcgccaggctaccgctgcagtaatggtgagcatggatgacactgctgta
ttcgttaccgttgttggccagaaaaaaactaaaccaggtcaggatttcttcccgctgacg
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatctcacgcctgattgaccgtccagttcgt
ccgctgttcccggaaggcttcattaacgaagtccaggttattgcgaccgtggtttctgtt
aacccacaggttaacccagacatcgttgcgatgatcggtgcatctgctgcactggctctg
tctggcctgccgttcaatggtccaatcggcgcagcgcgcgtcggttatatcaatgaccag
tacgtactgaacccaactgctgatgaaatcaacgaatcacgtctgaacctggttgttgcc
ggtacccagaacgcggtgctgatggtggaatcagaagctgacatcctgactgaagagcag
atgctgggcgctgtggtatatggccacgaccagcagcagatcgttatcgaaaacatcaat
gcgctggttgccgaagccggtaaaccacgttgggattggcagccactgccaactaacgat
gcactgattgcacgcgttactgccctggcagaagcgggcatcagcgatgcctatcgcatc
actgataagcaagagcgttacactcaggttggcgcagtgaaagacgcgaccatcgcggca
ctgcaggctgaagatgaaacgctggatgctggcgatatcgctgacatcgtacacgacctt
gagaagagcgttgttcgtagccgcatcatccgtggcgaaccgcgtatcgatggccgtgag
aaagatatgattcgtggtctggacgtgcgcactggcgtactgccacgtacgcacggttca
tcactgttcacccgtggtgaaacgcaggcgctggttaccgcaacgctgggtaccgcacgt
gatgcgcagaatctggatgagttgatgggcgagcgtactgatagcttcctgttccactac
aacttccctccgtactgcgtgggcgaaaccggtatggttggctcaccgaagcgtcgtgag
attggtcacggccgtctggcgaagcgtggcgtgctggccgtaatgcctaagcaagctgac
ttcccatacaccgtgcgtgtggtttcagaaatcaccgaatctaacggttcttcttcaatg
gcttccgtgtgtggtgcttctctggcactgatggacgctggcgtaccgatcaaagcagcc
gtagccggtattgcgatgggtctggttaaagaagccgacaactttgtggttctgtctgac
atcctgggtgacgaagatcacctcggcgacatggacttcaaagtagcaggtagccgcgat
ggtattactgcgctgcagatggatatcaaaatcgaaggcatcacccgcgaaattatgcag
gttgctctgaatcaggctaaaggtgcgcgtctgcacatcctgagcgtgatggaacaggca
atcagcacgccgcgtcaggaaatctctgagttcgcgccgcgcatttacaccatcaaaatc
agttcagacaagatcaaagatgtcatcggtaaaggcggctcggttatccgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgacggcaccgtgaagatcgctgcaact
gatagcctgaaagctaaagaagccattcgtcgtatcgaagagatcactgctgagatcgaa
gttggccgcatttactcaggtaaagtgacacgtatcgttgatttcggtgccttcgtggca
atcggcggcggtaaagaaggtttggttcacatctctcagatcgccgataagcgcgtagag
aaagtaaccgactatctgcagatgggccaggaagttccagtgaaagtaatggaagtggac
cgtcagggacgtgtacgcctgagcatcaaagaagcgacagagcagaaaccagcggaagaa
gttgctaccgctgcatctgatgcatctgacgccgagtaa
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