Pantoea sp. SOD02: NR302_02630
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Entry
NR302_02630 CDS
T10895
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
panz Pantoea sp. SOD02
Pathway
panz03018
RNA degradation
Brite
Enzymes [BR:
panz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NR302_02630
Messenger RNA biogenesis [BR:
panz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NR302_02630
Ribosome biogenesis [BR:
panz03009
]
Prokaryotic type
rRNA helicases
NR302_02630
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UVC29892
LinkDB
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Position
590092..592002
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AA seq
636 aa
AA seq
DB search
MTDIQTTFADLGLNADILESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLNNIDPTVKAPQILVLAPTRELAVQVAEAVTEFSKHMRGINVVALYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSLTTRPDISQSYWTAYGRKTDALVRFLE
AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVERISLVVNFDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLDQYRALLSKMQPGEDLDIETL
AAALLKMAQGERPLILPPEAPRPARREFSDRPDRGERRDSRDSRGPRESRDSRDGDRPRR
ERRDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLMGDAPVHERSERRPSAGGERRGNGAPRGEGAPRGEGAPR
RFSERREGGREGGRFSREGGRGPRPEGAAAPRRRDA
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattcaaaccacttttgctgaccttggcctgaacgccgacatcctcgaatca
ctgaacggtatgggctacgttaagccttctccaatccaggctgagtgtattcctcacctg
ctggctggccgtgacgtgttgggtatggcgcagaccggtagtggtaaaactgcggctttc
tcactgccgctgctaaacaacattgatcccactgttaaagcaccgcaaattttggtgctg
gcaccgacccgcgaattggcggtacaggttgctgaagccgtcacagaattctctaaacat
atgcgtggcattaacgttgtagccctgtacggcggccaacgttatgacgtacagctgcgc
gcactgcgtcaaggaccacaagttgttgtgggtacgcctggtcgtctgctggatcacctg
aagcgtggcacgttagatctgtctaacctgcgcggtctggtgctggacgaagctgatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagattccagacggt
catcagaccgcgctgttctcagcaaccatgccagaagcgattcgtcgtattaccaagcgc
ttcatgaaagatccacaggaagtgcgcatccagtcaagcctgactacgcgcccagacatt
tctcagtcttactggaccgcttacggccgtaaaactgacgcactggttcgcttcctggaa
gcagaagatttcgatgcagccatcatcttcgtgcgtaccaaaaatgccacgctggaagtg
gccgaagcgctggagcgcagcggttataacagcgcagcactgaacggtgatatgaaccag
gcactgcgtgagcagacgctggagcgtttgaaagatggtcgtctcgacatcctgatcgcg
accgacgttgccgcacgtggtctggacgttgagcgtatcagcctggtagtaaactttgat
atcccaatggatgcagagtcttacgttcaccgtatcggtcgtaccggccgtgcaggtcgt
gcaggtcgtgcgttgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatcgaa
cgcaccatgaagctgaccattccagaagttgaactgccgaacgcagaactgctgggtgag
cgtcgtctggctaagttcgcggctaaagtacagcagcagctggaaagcagcgatctggac
cagtaccgcgcactgctgagcaaaatgcagccgggcgaagatctggatatcgaaactctg
gccgcagcactgctgaaaatggctcagggcgaacgtccactgattctgccaccagaagca
ccgcgtccagcgcgtcgtgagttcagcgatcgtcctgaccgtggtgagcgtcgcgattca
cgtgattctcgtggtccacgcgaaagccgtgacagccgcgatggtgatcgtccacgtcgt
gaacgtcgtgacgttggcgaaatgcagctgtaccgcattgaagtaggccgcgatgatggt
gtagaagttcgtcacatcgttggcgcgatcgctaacgaaggcgacatcagcagccgttac
atcggtaacatcaagctgtttggtactcactcaaccatcgagctgccgaaaggcatgccg
ggcgaagtactgcagcacttcactcgtacgcgtattctgaacaagccgatgaatatgcag
ctgatgggtgatgcaccggtgcatgagcgtagcgaacgtcgtccatctgctggcggcgaa
cgtcgtggcaatggcgcaccgcgcggtgagggtgctccacgtggcgaaggcgctccacgt
cgcttctccgagcgtcgtgaaggtggccgtgaaggcggacgcttcagccgtgaaggtggc
cgtggcccgcgtccagaaggcgcagctgcaccacgtcgtcgtgacgcataa
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