Pantoea sp. SOD02: NR302_04115
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Entry
NR302_04115 CDS
T10895
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
panz Pantoea sp. SOD02
Pathway
panz03030
DNA replication
panz03430
Mismatch repair
panz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NR302_04115 (dnaE)
03430 Mismatch repair
NR302_04115 (dnaE)
03440 Homologous recombination
NR302_04115 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
panz03032
]
NR302_04115 (dnaE)
03400 DNA repair and recombination proteins [BR:
panz03400
]
NR302_04115 (dnaE)
Enzymes [BR:
panz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NR302_04115 (dnaE)
DNA replication proteins [BR:
panz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NR302_04115 (dnaE)
DNA repair and recombination proteins [BR:
panz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NR302_04115 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UVC30172
LinkDB
All DBs
Position
915651..919133
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLVKKAAALGMPAIAITDYINLCGLVRFYGSAHGA
GIKPIVGADFQVASELMGDELTQLTLLAANNTGYQNLTLLISRAYQRGYGIAGPIIDRDW
LLELGEGLILLSGGRRGDVGRSLLRGNSAMVAQCLSFYQQHFPNRYYLELMRTGRADEEA
YLHAAVELAIAEGIPVVATNEVCFLNEEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDFLVAKSREGL
EERMEFLFPDPAVRAEKRVEYDERLEIELTVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFLAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDENGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLPPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHETLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFQDGAEKMGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFKELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASITPWPEQIQLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTDRGKVTVAAGLVIAARVMVTKRGNRIGICTID
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLVGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttatacatctgcgcgtccacagtgattactccatggttgatggt
ctggcgaaaaccggacctttagtcaagaaggcggctgcgctgggcatgccggcgatcgcg
attaccgactacatcaacctgtgcgggctggtgcgtttttacggtagtgcgcatggcgcg
gggatcaagccgattgttggtgctgattttcaggttgccagtgaattaatgggcgatgag
ctgacgcagttaactctgctggcggccaataacaccggttatcaaaacctgaccttgttg
atttcgcgtgcgtatcagcgtggttacggcattgcgggcccaatcatcgatcgagactgg
ctactggagctgggcgaaggcctgattctgctgtctggcggacgtcgtggcgatgtgggc
cgcagtctgctgcgcggcaatagcgcgatggtcgcgcagtgtttgagcttttatcagcaa
cacttcccgaatcgttattaccttgaattgatgcgcaccggtcgcgccgatgaagaggcc
tatctgcatgctgccgtcgaactggcaattgccgaaggtattcctgtcgttgccaccaac
gaagtgtgcttccttaatgaagaagattttgatgcgcatgaaatccgcgtggcgattcat
gacggctacacgctggacgatcccaagcgtccgcgcaactacagtcctcagcaatatatg
cgcagtgaagaggagatgtgcgagctgttctcggacatcccggaagcgctggaaaatagc
gtagagattgctaagcgctgtaacgtgacggtgcgccttggcgagtatttcctgccgcag
ttccccaccggtgatatgagcactgaagacttcctcgtggcgaagtcgcgcgaaggcctg
gaagagcgtatggaattcctcttcccggatccggcggtgcgcgctgaaaaacgcgtggaa
tatgatgaacgtctggagattgaactcaccgttatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggacaacggtattcccgtgggtcca
ggccgtggttcgggtgccggttcattagtggcgtatgcgctgaaaattaccgatatcgat
ccgctggaatttgacctgctgttcgagcgcttcctgaacccggaacgtgtctcgatgccc
gacttcgacgtcgacttctgcatggagaaacgcgatcaggtgatcgatcacgtggccgat
atgtatggacgtgatgcggtatcgcagatcattacgttcggtaccatggcagcgaaagcg
gttattcgcgatgtgggacgcgtactcggccatccgtacggttttgttgatcgtatctct
aaactgatcccgccggatccaggcatgacgctggagaaagccttcctggctgaaccgcag
ctgccggagatctacgaggcagatgaagaggtgaaagcgctgatcgacatggcgcgtaaa
ctggaaggtgtcacgcgtaacgccggtaaacacgccggtggtgtggtgatctcgccgacc
aaaatcaccgactttgcgccgctgtactgtgatgagaacgggcagttcccggttactcag
tttgataagaatgacgtggaatatgccgggctggtgaagtttgacttccttggtctgcgt
acgctcaccatcattgactgggcgctgaagatgattaacccgcgccgtgaaaagcagggt
ttgccaccgattgatatcgccgccatcccgctggaagacaaaaaaagcttcgatatgctg
cagcgctcggaaactactgcggtattccagcttgaatcgcgcggcatgaaagatctgatc
aaacgtctgaagcctgactgcttcgaagatatgatcgcactggtggcgctgttccgtccg
ggaccgctgcaatcgggcatggtagataacttcatcgaccgtaagcacggccgcgaagag
atttcgtatccggatattcagtggcagcacgaaaccctgaaaccggtgctggagccgacc
tacggcatcattctgtatcaggaacaggtgatgcagattgctcaggtgctgtctggctat
acgctgggcggcgcggacatgttgcgtcgtgcgatgggtaaaaagaaacctgaagagatg
gcgaagcagcgttcggtgttccaggacggtgcggagaagatgggcgtcgacggcgaactg
tcgatgaaaatcttcgatctggtagagaagttcgccggctatggctttaacaagtcgcac
tccgctgcttacgcactggtttcttaccaaacgctgtggctgaaagcgcactatccggca
gagttcatggcggccgtaatgaccgccgatatggacaacaccgagaaagtggttggcctg
gttgatgaatgctggcgcatgggcctcaaagtgctgccgccagacatcaattcaggactc
tacccgtttcacgttaacgatgaaggtgagatcgtgtacggcatcggcgcgatcaaaggc
gtgggtgaaggtccgatcgaagcgatcattgaagcgcgtaatgaaggcggttacttcaaa
gagctgtttgatctctgtgcgcgcaccgacaccaaaaagatcaaccgtcgcgtgatggaa
aaactgatcatgtcgggcgcgttcgatcgtcttggcccgcatcgcgcggccttgatgagt
gcgcttggcgatgccttaaaagcggccgatcagcatgccaaagccgaagccatcggccag
gccgatatgtttggcgtgctggcggaagaaccggagcaggtagagaaatcctacgccagc
atcacgccgtggcctgaacaaattcaactggatggcgaacgtgagaccttgggtctgtat
ctcaccggacatccaattaatcagtatttgaaagaaattgagcgttacgtcggcggcatg
cgcctgaaagacatgcatccgacagatcgtggtaaagtaaccgtcgcggcggggctggtg
attgccgcccgcgtgatggtcactaaacgcggcaacagaattggtatttgtacgattgac
gatcgttctggtcgtcttgaagtgatgttatttaccgatgcgttagataaataccagcag
ttgctggagaaggaccgtatcctgatcgtcagtggacaggtcagctttgatgactttagc
ggtggccttaaaatgaccgctcgggaagttatggacatcgacgaagcgcgggaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgccagtctctggagcctcatcgctccgggaccattccggtgcatctctactatcag
agagccgatgcgcgagcgaagctacgctttggtgcagcgtggcgtatttcgcccagcgat
cgtttactcaacgatttgcggtcgttagtaggatcggagcaggtggaactggagtttgac
taa
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