Pantoea sp. SOD02: NR302_04820
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Entry
NR302_04820 CDS
T10895
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panz03400
]
NR302_04820
DNA repair and recombination proteins [BR:
panz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NR302_04820
Archaeal homologous recombinant proteins
NR302_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
AAA_21
cobW
MobB
Motif
Other DBs
NCBI-ProteinID:
UVC30293
LinkDB
All DBs
Position
complement(1056955..1060638)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILTLRFKNLNALRGEWFIDFRREPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGTLSQTQNELITRDTAECLAEVEFEIKGEAWRAFWSQNRARGQADGKLQAPRVELARVA
DNQIIADKVGDKLKAIETLSGLDFARFTRSMMLSQGQFAAFLNAKPGERAELLEELTGTE
IYGQISVQIYERWRTARSELDTLRARAGGMSLLDEARRAELTQQLAELAVQEKSLSEQLT
LAQHQQQWLVQQQQLTQEQQQAEQTLLAAQQAWQQADGDRQRLARAEPAEKLREKLQQRE
QLQGDLRTLEQQSQQLQAQQQQAKTALQQGESHYQAAQQAREQAIQQQQQIETLLTEQVI
PLDQRITTLSQQLDEQQRLHLQQQQALQTSQTALSQQQQVSERLQQQLAQQQEYRAREAA
VAHWGAELTRWQAEIARLDEREQTLTQLIAQQQQQRSQLEQHQQAQAQREQAAQPLQQAE
TQAAQQRLQAEQALTSLEAEIGSAQLRADLTQHQTQRAARQQLSLLAAQWRALQPQRLQR
QQKLMQLQQQHQEAELALQALRDEYKREHQALLDVRKICELERTIAQLADERAKLQPDQP
CPLCGSCQHPAIAQYQQLEPGANQQRLTELETRVAQLKESGTAKGEQQKLSLQQQQALQQ
EIADYDQQLATVNTQWQALSGELALTCTLEQQDDFAQWQQQQDAQEQTQQQQLQTREDAA
RALQQAKDAHLQQQQLWQQHQNQQQLAQQQIVSTQQTLDEISQREASERSAMQQLAQQLE
QQLAQHQLSLPDAAERESWLHTLQQRWSAWQENERLHGELQPQLAKAESERSSLQQNLAR
EQQRLDELQQTLSALQQQRQQQQQQRQQLFGDRRVAEARQQQHAALQQCEQALAQQLQQW
QQAQSSLHSLNGQCEQIAAQQQTLRERAAAAESAFLAALQQSDFADETALRAALLDEREV
HELRQQLQTLDQQRQQQITLSEQLTQRCTAHQQQRPADLSDEVSATIQQQLEQLRVTLRD
NARQQGEAQQQLHSDAQLRSQQQSLLTQIATDEVELAQLGRLNDLVGSAKGDKFRRFAQG
LTLDHLVWLANRQLDRLHGRYLLQRRVSEELELEVVDTWQADATRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIESLFLDEGFGTLDAETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIRVRKMNGLGYSKLELPGDLA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgacgttacgttttaaaaacctcaatgcgctgcgcggcgaatggtttatc
gatttccgccgtgagccctttgccagcaacggattgtttgccattaccggcgccaccggc
gcgggcaaaaccaccttactcgatgcgatttgtctggcgctctatcaccaaacgccgcgc
ctcggcacgctgtcacaaacccagaatgagctgatcacgcgcgacaccgccgagtgtctg
gcagaagtggagtttgagatcaaaggcgaagcctggcgcgccttctggagccagaaccgc
gcgcgcggtcaggccgacggcaagctgcaggcaccgcgcgtcgagctggcgcgcgtcgct
gataatcagatcatcgccgataaagtcggcgacaagctaaaagcgattgaaaccctgtcg
ggactcgatttcgcccgttttacccgctcaatgatgttgtcgcaaggccagtttgccgcc
ttcctgaatgccaaacccggcgaacgcgccgaattgctggaagagctgaccggcaccgaa
atctacgggcaaatctccgtgcagatttacgaacgctggcgcaccgcacgcagcgagctg
gatacgctgcgcgcccgcgccggtggtatgtcgctgctcgatgaagcgcgccgtgcagag
ctgacgcagcagctggcagaactcgccgttcaggagaaatcactaagcgaacagctaacg
ctggcgcagcatcagcaacaatggctggtgcagcagcaacagctgacgcaggaacagcaa
caggccgaacagacgctgcttgccgcgcaacaggcgtggcagcaggcggatggcgatcgt
cagcggctggcgcgggccgaaccggcagaaaaactgcgcgagaagctacagcagcgcgaa
cagctgcagggcgatctccgcacgctggaacagcaatcgcagcagctgcaggcgcaacag
cagcaggccaaaaccgcgctgcaacagggcgaaagccattatcaggccgcgcagcaggcg
cgcgagcaggcgatacagcaacagcagcagatcgaaacgctgctgaccgagcaggttatc
ccgctcgatcaacgcattaccaccctctcgcagcaactggatgaacagcagcggctgcat
ctgcagcagcaacaggcgctgcaaaccagccaaaccgcgctgagccagcaacagcaggta
agtgaacgtttacaacagcagctggcgcagcagcaggaatatcgcgcccgcgaagccgcc
gtcgcccattggggggcggaactaacgcgctggcaggcggagatcgcccgactggatgag
cgcgaacagacgctgacgcagctcatcgcgcagcagcaacagcagcgcagccagctggag
cagcatcagcaggcgcaggctcagcgtgaacaggcggcgcaaccgttgcagcaagccgaa
actcaggccgcgcagcagcgtctgcaagcggagcaagcactgacttcgcttgaagccgag
atcggcagcgcgcagttgcgtgcagacctgacacaacatcaaacgcaacgtgccgcacgc
cagcagctcagcctgctcgccgcgcagtggcgcgcgttgcagccacagcgcttgcagcgt
cagcagaaactgatgcagcttcagcagcagcatcaggaagccgaactggcgttacaggcg
ctgcgcgacgagtacaaacgggaacatcaggcgttgcttgatgtgcgcaaaatctgcgag
ctggagcgcaccatcgctcagctggccgacgaacgtgccaaactgcagccggatcagccc
tgcccgctgtgcggctcgtgtcagcatccggctatcgcgcaatatcagcagcttgagccc
ggtgccaatcagcagcgtttaactgagctggaaacgcgcgtggcgcagctgaaagagtcc
ggcaccgccaaaggcgagcagcagaagctgtcgctgcaacagcagcaggcgttgcagcag
gaaatcgctgattacgaccagcaactggcaacggtcaacacccaatggcaagcgctgagc
ggtgagctggcacttacctgcacactggagcagcaagacgattttgcgcagtggcaacag
cagcaggatgcgcaggaacaaacgcagcaacagcagctgcagacacgggaagacgccgcg
cgtgcgctgcagcaggcgaaggatgcacatctgcagcagcaacagctctggcaacaacat
caaaatcaacagcagctggcgcagcagcagatcgtcagcacgcagcagacgctggatgaa
atcagccagcgcgaagccagcgaacgcagcgccatgcagcaactggcgcagcagctggaa
caacagctggcgcagcatcagctcagtttgccagacgcggctgagcgggaaagctggctc
cacacgctacagcagcgctggagcgcatggcaggaaaatgagcgcttacacggcgagttg
cagccgcagctggcaaaagccgaaagcgagcgcagcagcctgcagcagaatctggcgcgt
gaacagcagcggctcgatgaactgcagcagacgctcagcgcgctgcaacagcagcgccag
cagcagcaacaacagcgtcagcagctgtttggcgatcgtcgggtggcggaagcccgacag
cagcagcacgccgcgctgcaacagtgtgaacaagcgctggcgcaacagctacagcagtgg
cagcaggcgcaaagctcgctgcacagcctgaatggccaatgtgagcagatcgcggcgcag
caacaaaccttgcgtgaacgcgctgccgcagccgaaagcgccttcctcgccgcgctgcag
cagagtgattttgccgatgaaacggcgctgcgtgccgccctgctggatgagcgcgaggtg
catgaactgcgccaacaattgcaaacgctcgatcagcagcgccagcagcagattactctc
agcgaacagctcactcagcgctgcacggcgcatcagcagcagcgcccggccgatctcagc
gatgaagtctccgccactatccagcaacagctggaacagctgcgcgtgactttacgtgac
aatgcccgtcaacagggtgaagcgcagcagcagttgcacagcgatgcgcaactgcgttca
cagcaacaatcgttgctgacgcaaattgctaccgatgaagtagagctggcgcagctgggc
cgcctgaacgatctggtaggttcggctaaaggcgataaattccgccgcttcgctcaaggc
ctgacgctcgatcatctggtgtggctggcgaaccgccagctcgatcgcttgcacggtcgc
tatctgctgcagcgccgcgtcagtgaagagctggagctggaagtggtggatacctggcag
gccgacgccacgcgcgatacccgcacgctgtcgggcggcgagagtttcctcgtcagcctg
gcgctggcgttagcgctgtcggatttggtgagtcataaaacgcgcatcgaatcgctgttc
ctcgacgaaggcttcggcacactggatgccgagacgctggacaccgcgctggatgcgctc
gatgccctgaacgccagcggcaaaaccatcggcgtgataagccatgtcgaagcgatgaaa
gagcgcattccggtgcagatccgcgtccgcaagatgaacggtttgggttacagcaagctg
gagttgccgggagatctagcttaa
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integrated database retrieval system
