Pantoea sp. SOD02: NR302_05820
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Entry
NR302_05820 CDS
T10895
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
panz Pantoea sp. SOD02
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
panz03400
]
NR302_05820 (phrB)
Enzymes [BR:
panz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NR302_05820 (phrB)
DNA repair and recombination proteins [BR:
panz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NR302_05820 (phrB)
Prokaryotic type
NR302_05820 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UVC30477
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All DBs
Position
1258224..1259651
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AA seq
475 aa
AA seq
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MTTHLVWLRNDLRINDNMALAAACRDSQATVMALFIATPQQWQQHHMAPKQAAFIQQNLS
LLQASLAERGIPLHFHQCDDFAASIDYLAEFCQQQQVDALFYNYQYEINERERDARAEKR
LDAQGVICQGFDDSLLLPPGSVQTGSNTMFKVFTPFSRAFVRRLHQGLPECYHAPKARDG
APVSIKKKIPAFDYPCEAFDDSLFQAGEEAALKQLRHFAKQAVQHYPDQRDLPAIDGTSR
LSAYLAIGVLSPRQCLHRVLKEHPDALNEGTAFTWLNELIWREFYRHLMVAFPALCKHQP
FVDWTRNVDWQQNEAHLKAWQQGKTGYPIVDAAMRQLNTLGWMHNRLRMITASFLVKDLL
IDWREGERYFMQQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKQGAFIR
QWLPELKEVPDSDIHQPQVWAQKNNKKLDYPAPIVEHKDARKKTLDAFERARSAA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttagtttggttgcgtaacgatctgcgcatcaatgacaacatggcgctg
gccgctgcctgccgcgatagccaggctacagtgatggcgctgtttatagccacaccacag
cagtggcagcagcaccacatggcacctaagcaggcggcgttcatccagcaaaatctcagt
ttgttgcaggcatcgctggccgaacgcggcattcctttgcacttccatcagtgtgatgac
tttgccgcttcgattgattatctggcggaattttgccagcagcagcaggttgatgcgctg
ttctacaactatcagtacgaaatcaacgaacgagaacgcgatgccagggcagaaaaacgt
ctggatgcgcagggcgtgatttgtcagggattcgacgacagcctactgttgccgccgggc
agcgtgcaaaccggcagcaataccatgttcaaggtgttcacgccgttcagcagagccttt
gttcgtcgcctgcatcagggcttgccggagtgttatcacgcgccgaaagcgcgtgacggc
gcgcccgtcagcatcaaaaagaagatccccgcctttgattatccctgtgaagcttttgat
gacagcttgttccaggcaggggaagaggccgcgttaaaacagctgcgccacttcgctaaa
caggcggtgcaacattatccggatcaacgtgatttgccggccattgacggcaccagtcgg
ttatcggcctatctggcgatcggcgtgttgtcgccgcgtcagtgtctgcatcgcgtattg
aaagagcatcccgatgcgcttaacgagggcacggcttttacctggctgaacgaactgatt
tggcgcgaattctatcgtcatctgatggtggcatttcctgcgctgtgtaagcatcagccg
tttgtcgactggacgcgcaatgtcgattggcagcaaaacgaagcgcacctaaaagcctgg
cagcagggtaaaaccggctatccgatcgttgatgcggccatgcgtcagctcaacacgctc
ggctggatgcacaatcgcttgcgcatgattactgccagtttcctggtgaaggatctattg
atcgactggcgtgaaggtgagcgctatttcatgcagcagttgatcgatggcgatctggcc
gctaacaacggcggctggcagtgggccgcgtcaaccggcactgatgccgcgccctatttt
cgtatcttcaatcccaccacgcagggcgagcgttttgataaacagggcgcgtttatccgt
cagtggctgccggaattaaaggaagtgcccgacagcgatatccatcagccgcaggtgtgg
gcgcagaaaaataacaagaaactcgattatcccgcgccaatcgtggaacataaggacgca
cgtaaaaagacactagacgcctttgagcgcgctcgcagcgcggcttga
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