Pantoea sp. SOD02: NR302_06915
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Entry
NR302_06915 CDS
T10895
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
panz Pantoea sp. SOD02
Pathway
panz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NR302_06915 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panz02000
]
NR302_06915 (msbA)
Enzymes [BR:
panz01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NR302_06915 (msbA)
Transporters [BR:
panz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NR302_06915 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
DUF87
AAA_22
AAA_25
RsgA_GTPase
AAA_16
APS_kinase
nSTAND3
AAA_29
AAA_24
ABC_membrane_2
AAA_30
HUTI_composite_bact
AAA_18
MMR_HSR1
Ploopntkinase3
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
UVC30684
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Position
1498859..1500607
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AA seq
582 aa
AA seq
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MHQDKDLSTWQTFRRLWPMIAPHKAGLYVSAVALILNAAGDTLMLSLLKPLLDDGFGKAD
RSVMLWMPLVVIGLMLVRGVTSYISSYCISWVSGNVVMNMRRRLFGHMMGMPVTFFDQQS
TGTLLSRITYDSEQVASSSSSALVTVVREGASIIGLFIMMFYYSWQLSLILIVLAPIVSF
AIRTVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVEANRFSQVSNKMRQQ
GMKLVSASSISDPVIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEVDNGKREMDRAKGDVEFRNVTFTYPGREIPALR
DINLSLPAGKTVALVGRSGSGKSTMASLLTRFYDIDSGEILLDGHDLREYTLRSLRNQVA
LVSQNVHLFNDTIANNIAYARNGQYTREQIEQAATMAHAMDFIQKMDKGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEKADEIVVVEDGRIVERGTHSVLLEQKGAYAQLHKLQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagataaagatctctcaacgtggcagacattccgtcgactctggccgatgatt
gcgccccacaaggctggcctgtatgtgtcagcggtggcgctgatactcaatgcggcaggc
gataccctgatgctctctctgttgaaacctttactggatgatggtttcggtaaagctgac
agatccgtaatgttgtggatgccgttagtggtaatcggcctgatgctggtgcgtggcgtg
accagctatatctccagttactgcatctcatgggtttccggcaacgtggtcatgaacatg
cgtcgccgtctgttcgggcatatgatgggcatgccggtaaccttctttgaccagcaatca
acgggtacgctgctatcgcgcatcacctacgattctgagcaagttgcctcttcttcttca
agcgcattggttaccgtggtgcgtgaaggggcctcgatcattggcctgttcattatgatg
ttctattacagctggcagctctctttaattctcattgtgctggcaccgatcgtctccttt
gctattcgtaccgtttccaagcgtttccgcagcattagtaagaacatgcagaacactatg
ggacaggtcaccaccagcgccgagcagatgctgaaagggcataaagaagtgctgattttt
ggtggtcaggaagttgaggcaaaccgtttttctcaggtcagcaataaaatgcgtcagcaa
ggcatgaaactggtgtcggcgtcttcaatttctgatcctgtgattcagttgattgcctca
ctggcactggcatttgtgctttatgccgccagcttcccaagcgtgatggagacattaaca
gccggtactatcaccgtggtcttctcatcgatgatcgccctgatgcgtccgctgaagtca
ctgaccaacgtgaatgcgcagttccagcgcggtatggcggcatgtcagacgctgttctcg
attctcgacagtgagcaggaagtggataacggcaagcgtgagatggatcgcgctaaaggt
gatgttgaattccgtaacgtgacctttacctatccaggccgtgaaatccctgcgctgcgc
gatatcaatctgtcgctgcctgccggtaaaacggttgcactggtcggtcgttccggctca
ggtaaatccaccatggccagtttgttgacgcgcttctacgacatcgacagcggtgaaatc
ttgctggatggtcatgatttacgtgaatacaccctgcgctcactgcgtaaccaggtcgcg
ctggtttctcagaacgtacaccttttcaacgacaccattgctaacaacattgcttatgcc
cgcaatggtcaatacacgcgcgagcaaatcgagcaggctgcgactatggcgcatgcgatg
gactttatccagaagatggataaaggcctcgataccgttattggtgagaatggggtgctg
ctctccggtggtcagcgtcaacgtattgcaattgcgcgtgcgttattgcgtgactgcccg
attttgattctcgatgaagccacatcagcgctggataccgaatctgagcgtgcgattcag
gccgcacttgatgagctgcaaaaaaaccgtacttcactggtgattgcgcaccgtctgtcg
accattgaaaaagctgatgagatcgtcgtggttgaagatggtcgcattgtcgaacgcggt
acccacagcgtgctgctggaacagaagggcgcctatgcgcagcttcacaagctgcagttc
ggtcaatga
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