Pantoea sp. SOD02: NR302_06935
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Entry
NR302_06935 CDS
T10895
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
panz Pantoea sp. SOD02
Pathway
panz00541
Biosynthesis of various nucleotide sugars
panz01100
Metabolic pathways
panz01250
Biosynthesis of nucleotide sugars
Module
panz_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NR302_06935 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
panz01005
]
NR302_06935 (kdsB)
Enzymes [BR:
panz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
NR302_06935 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
panz01005
]
Lipid A
NR302_06935 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
PylC-like_N
Motif
Other DBs
NCBI-ProteinID:
UVC30688
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Position
1503115..1503864
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AA seq
249 aa
AA seq
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MSFVAIIPARYASTRLPGKPLVDIQGKPMVLHVMERARESGADRVIVATDHPDVAAAVTA
AGGEVCMTRVDHQSGTERLAEVVEKYQFADDTIIVNVQGDEPMIPAEIVRQVAVNLAQSE
AGMATLAVPITDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRERYAQSREQIGDTLLR
HIGIYAYRAGFIRRYIAWEPCPLEHIELLEQLRVLWYGEKIHVAVAKAIPSVGVDTPEDL
ERVRLAMQG
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttgccattattcccgcgcgttacgcttcaacgcgtctgcccggcaaaccg
ctggtggatattcagggtaaaccgatggtgctgcacgtcatggaacgcgcgcgtgaatcg
ggtgccgatcgcgtgattgtcgccaccgatcatccggatgtggcggcggcggtaaccgca
gcgggcggcgaagtgtgcatgacgcgggtcgatcatcagtctggcaccgagcgtttggca
gaagtggtcgagaagtatcagtttgccgacgacaccatcatcgttaacgtgcagggcgac
gagccgatgatcccggcggagattgtacgtcaggtggcagttaatctggcgcaatctgaa
gccggaatggcgacgctagcggtgccgatcaccgatgcagaagaagcctttaacccgaac
gcggtgaaagtggtgatggacgccaaaggttatgcgctttacttctcacgcgccaccatt
ccctgggatcgcgagcgttatgctcaatcgcgcgagcagattggcgacacgctgctgcgc
cacattggtatctacgcttatcgcgccggttttatccgtcgctatatcgcgtgggaacct
tgcccgctggagcacattgagctgctcgaacagctgcgcgtgctgtggtacggtgaaaag
attcacgtcgcggtggcaaaagctatcccaagtgttggggtggatacgccggaagacctt
gagcgggttcgtctcgctatgcagggttaa
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